Schleiferilactobacillus harbinensis: D1010_08295
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Entry
D1010_08295 CDS
T06855
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03030
DNA replication
lhb03430
Mismatch repair
lhb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1010_08295 (dnaE)
03430 Mismatch repair
D1010_08295 (dnaE)
03440 Homologous recombination
D1010_08295 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhb03032
]
D1010_08295 (dnaE)
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_08295 (dnaE)
Enzymes [BR:
lhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1010_08295 (dnaE)
DNA replication proteins [BR:
lhb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1010_08295 (dnaE)
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1010_08295 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
GGDEF_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QFR23398
UniProt:
A0A5P8M4F4
LinkDB
All DBs
Position
1584507..1587788
Genome browser
AA seq
1093 aa
AA seq
DB search
MAFTQLQVISAYSLLESPTRLTDLIQAAGERGYTALALTDHNVLYGSVDFYRAAQTAGIK
PLQGLLLDMAPLPPAAGPVNTDDGVPVPAGRLLLLALDQTGYHNLMLLSSAAMTAPARQC
SWAAFQAHHAGLAVIVPPFNSLVAFWAHRQNAATAAAVLTQLQTAAADSAVYLGISRHLS
TSEQQFLQALADQQQLPLAAVDDVRYLAPTDAFSAQVLQAVDRGATMDHPETLAATRGQF
YLPRAKDAEEAYIQAGLQSAVENTAKLAAQANVTMTFKRAELPHFPTPNGETALAFLTTL
AETGLQKRFAGQSVPTAYTQRLHYELGVIDQMGFPDYFLIVWDVMNYMHQTNVMTGPGRG
SAAGSLVSYALAITEVDPIRYHLLFERFLNPERQQMPDIDLDIPDNRREELIQYVHEKYG
DNHMAQIITFGTLAAKAALRDVGRVFGLSMPELGAWTKTIPPVLHVSLAQAAKDSLPLQN
RIKDSPLNRLLFDTALHLEGLPRNTSTHAAGIVLSDHNLTDVVAVQEGSNGVKLIQQPMG
NAEALGLLKMDFLGLRNLSILAAAVHSVEKETGREFDPRRIPLDDEETLALFRAGDTNGV
FQFESSGIKNVLRQLAPTSFEDIVATNALYRPGPMDNIPTFIARKHGQAPIEYPAPALKD
ILAPTYGVLVYQEQVMQVANVMGGFSLAKADSLRRAMSKKKKGVLDSLRTDFLQGAQHQG
YSEADAQKVYDYIESFANYGFNRSHAVAYSMVAFWLAYLKVHYPAPFFCALLNSVRGNDT
KIKTYVQEARQHGVRLAYPDVNASWAYFSVAQGTIRFGLTLIKGIRTDFTQAILDERKAN
GAFHSVDDFLRRVPAKFLKDDALTALTLSGAFDRLENNRRQLVANLHSRVQSAEFAGDNT
SLFSLLTPKETQITDYDAGERADLAAQYLGAYITGHPTDRYVLLKGRYPIISVSNMSANA
PVTLLLYVRHVKTIRTKKGDEMAFLTAEDASGGVDVTIFPNLYRQISQQLTNDTVYLVQG
KTQERNGELQVIANQLQAASPLLAEAVPLTLYVQVPAALDNPAIHREIAEILRVGQGKTP
WSFIGPNPVKNVC
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttacgcaattacaggtgatatcggcatacagcctgttagaaagtcccactagg
ctgacagatttgatccaggcagcgggggagcgcggttatacggcgctggccctgacggat
cacaacgtgctgtacggcagtgttgacttctatcgagcggcgcagacggcaggaatcaaa
ccattacaggggctgctgctggatatggcgccgctgcctccagcggccgggccggtgaat
actgacgatggtgtgccggtaccggctggccggctgctgctcctggcattggatcaaacg
gggtaccataatctaatgctgctgtcgtcagccgccatgaccgcaccggcccggcaatgc
agctgggcggcgttccaggcacaccatgcggggttggccgtgatcgtgccgcctttcaat
agtttggttgctttttgggcgcaccgacaaaatgcggccacagccgcggcggtgctcacc
cagctgcagactgccgcggcggacagtgcggtttatctgggtatcagccggcatttgtcg
accagtgagcagcagtttttgcaggctttggcggatcagcagcagctgcccctagcggct
gtggacgacgtgcggtatttggcccccacggatgccttttctgcccaggtactgcaagcg
gtggaccggggcgccacgatggatcacccggagaccttggcggcgacccggggccagttc
tatttgccgcgggccaaggacgcggaggaagcttacattcaggccggactgcaaagtgct
gtcgagaataccgccaagctggcggcccaagccaatgtcacgatgaccttcaaacgggca
gaactgccgcattttccgacccccaacggcgaaacggcgctggcctttttgacgactctg
gcggagaccggcctgcaaaagcgctttgccggccaaagtgtaccgacggcgtatacccag
cggctgcactatgagctgggggtcatcgatcagatgggcttccctgattattttctaatc
gtctgggatgtcatgaactacatgcaccaaaccaacgttatgaccggccctggccggggc
tcagcggccggctcgctggtcagctatgcgttggcgatcacggaagtcgatccgattcgg
taccatctcttatttgaacgtttcttgaatcctgaacgccagcagatgccggatatcgac
ttggatattccagacaaccggcgggaagaactgattcagtatgttcatgaaaaatacggc
gacaaccatatggcacaaatcatcacctttggcactttagctgctaaagcagcactgcgc
gatgtcggccgggtattcggcctcagcatgccggagctgggggcgtggacaaaaaccatt
ccgccagtgctccatgtatccctggcgcaggctgcaaaagactcgctgcccttgcaaaac
cgaatcaaggatagtccgctcaaccggcttttgtttgatacagcgctgcatctggagggg
ctgccccgcaacacgtccacccacgcggccggcattgtgttaagcgaccataacttgacg
gatgttgtcgcggtgcaggagggcagcaacggggtcaaactgatccagcagcctatgggc
aacgctgaagcactggggttgttgaagatggacttcttgggcctgcgcaatctgtccatt
ctggccgcggccgtgcattcagtggaaaaggagacaggccgggaatttgatccgcgccgg
atcccccttgatgacgaggagacgctggcccttttccgggctggggataccaacggtgtg
tttcagtttgaatccagcggcatcaagaacgtgctgcgccagttagcgcccaccagtttt
gaagatatcgtggcgaccaatgccctgtaccggccggggccgatggataacattccgact
tttattgcccgtaagcacggtcaggcaccaatcgaatacccagctccggcactcaaggat
attttggctccgacttacggtgtgctggtttatcaggaacaggtcatgcaagtggccaac
gtgatgggcggcttctcgctggccaaagccgattcccttcggcgggcaatgagcaagaag
aaaaaaggggtcttggacagcctgcgcaccgactttctccaaggcgcgcagcaccagggt
tactccgaagcagatgcacagaaggtttatgactatattgaaagttttgccaattacggc
ttcaaccggtcccatgcggtggcgtacagtatggtcgcattttggctggcctatctgaaa
gtacattatccggcgccgtttttctgtgctttgctgaattcggtgcgcggcaacgacaca
aagatcaagacgtatgtccaggaggctcggcagcatggcgttcgcttggcttatcccgat
gtgaatgcttcctgggcctatttctcggtggctcaggggacgatccggttcgggctgacc
ttgatcaaaggtattcgcaccgactttacccaagccatcttagatgaacgcaaggctaac
ggtgcctttcattccgtggatgatttcttgcgccgggtgccggccaagttcttaaaagat
gatgcgctgacggcgctgaccttgagcggggcgtttgaccggttggaaaacaaccggcgt
cagctggtggccaatctgcacagccgggtgcagagcgctgagtttgccggagacaatacg
tcgttattcagtttactgacgcctaaggagactcagatcaccgactatgacgccggggaa
cgggccgatttggccgcgcagtatttgggtgcctacatcaccggccaccccacggaccgt
tacgtcttgctgaagggccgctatcccattatcagtgtcagcaatatgtcggccaatgcc
ccggtgacgctgctgctgtacgtgcgccacgtcaaaacgatccggaccaagaagggcgac
gaaatggcctttttaactgctgaagatgccagcggcggagtagatgtcaccattttcccc
aacctgtaccgtcagatcagtcagcagctgaccaatgatacagtctatcttgttcagggc
aagacgcaggaacgcaacggcgaactgcaggtgattgccaatcagctgcaggccgcctct
ccgctgctggcggaggccgtgccgctgaccctgtatgtccaggtgccggctgcgctggat
aacccggccatccatcgcgagattgccgagatcctgcgggtgggtcaaggaaagaccccg
tggtcgtttatcggcccaaatccggtgaaaaacgtctgttga
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