Schleiferilactobacillus harbinensis: D1010_08460
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Entry
D1010_08460 CDS
T06855
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lhb
Schleiferilactobacillus harbinensis
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhb03032
]
D1010_08460 (topA)
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_08460 (topA)
Enzymes [BR:
lhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D1010_08460 (topA)
DNA replication proteins [BR:
lhb03032
]
Prokaryotic type
DNA Topoisomerases
D1010_08460 (topA)
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1010_08460 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
PI_PP_I
Motif
Other DBs
NCBI-ProteinID:
QFR23429
UniProt:
A0A510TRB9
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All DBs
Position
1618962..1621034
Genome browser
AA seq
690 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKYLGRNYRVVASLGHIRDLPRSQMGVDIENNYQPKYISIRGK
GDVIKDLKKEAKKADHIYLAADPDREGEAIAWHVSHILNLDPADKNRVVFNEITKDTVKN
AFKDPRSIDMKLVDAQQARRVLDRLVGYSISPILWKKVKKGLSAGRVQSIALKLVIDREN
AIKAFVPEEYWTIDAEMAKGKETFAASFYGEKGRKKALKNNADVQKVLGKVDKKKPFAVT
KVVKRERKRFPAAPFTTSSLQQEANRRLNYKTRKTMMIAQQLYEGINLGGKEGTTGLITY
MRTDSTRIASIAKHEAAGFIHDTYGAEYAAVKVQQKKNQEFAQDAHEAIRPTSTLRTPKS
LESVLNRDQMRLYSLIWSRFVASEMTPAVYDTITADMVQNDVQFRATGSRTKFDGFTKLY
TQSGDETKDRLLPELNEGDSVTLKKTDPAQHFTQPPARYTEASLVKALEENGVGRPSTYS
PTIDTIQKRYYVKLNGKSFEPTELGEIVNTLIVEFFPDIVNVDFTAKLEDELDEIETGSE
NWVNVVDQYYQPFAKEIDSAEEKIQKVQIKDEPAGFNCDICGAPMVIKLGRYGKFYACSR
FPNCRNTKPIVKEIGVICPKCGIGQVVERKSKRNRLFYGCSRYPDCDFVSWDKPVGRDCP
VCGHFLVDKKVKGGRQVQCPNGDYDEPIQK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttggctaagaacctcgtgatcgttgaatcgcctgcgaaggccaaaacaattgaaaagtat
cttggccgtaattaccgggtcgtggccagcttaggccatatccgcgacctgccccggagt
caaatgggggtcgacattgaaaacaattaccagccaaaatatatatcaattcgcggtaaa
ggcgacgtcattaaagatctgaaaaaggaagccaaaaaggcggaccatatttacctcgcg
gccgacccggatcgggagggcgaagccattgcctggcatgtttcccacatcctgaatctc
gacccggcggataagaaccgggtcgtattcaacgaaatcacgaaagataccgtgaaaaat
gccttcaaggacccccgcagcattgacatgaaattggttgatgcccagcaggcccggcgg
gtattggatcggctcgtgggctactccatttcaccgattctttggaaaaaagttaaaaag
ggtctcagtgccggccgggtccaatccatcgcactgaagctggtgatcgatcgggaaaat
gcaatcaaggcctttgtgccggaagagtattggacgatcgatgccgaaatggccaagggc
aaggaaacgttcgcggccagtttttatggtgaaaaagggcggaaaaaagccctcaagaac
aatgcggatgtccaaaaagtgttaggcaaggtcgataagaaaaagcccttcgccgtcaca
aaagttgtgaagcgggaacgcaaacgattccccgccgcgccgttcaccaccagctccttg
cagcaggaggccaaccggcgcttgaattacaagacccggaagaccatgatgattgcccag
cagctgtacgaaggcatcaacctcggcggcaaagagggtacgaccgggctgatcacgtat
atgcggactgactccactcggatcgcctcaatcgctaaacacgaagccgccggtttcatc
catgacacctatggcgccgagtatgctgcggtgaaggtccagcaaaagaagaaccaggaa
tttgcccaggatgcccatgaagccattcggcccaccagtacgctgcgtacaccgaagagt
ctggaaagtgtcttgaatcgcgatcaaatgcggttatacagtctgatctggtcccgtttc
gtggccagcgagatgaccccggcggtttacgacaccatcaccgcggacatggtccaaaac
gacgtccaattccgggcaaccggctcccggacgaagtttgacgggttcaccaagctctat
acccagagtggtgatgagaccaaggacaggctgctgccggaattgaacgaaggcgacagc
gtgacgctgaagaagactgacccggctcagcactttacccagccgccggcccgctatact
gaagccagtctggtcaaagccttggaagaaaacggtgtcggccggccctccacgtattct
ccgaccatcgacacgatccagaagcggtactacgtgaaactcaatgggaagagctttgag
cccactgagctgggcgagatcgtcaatacgctgatcgtggaattcttcccggatatcgtc
aacgtggacttcacggcgaaactggaagatgaactggacgagattgaaaccggctcagag
aattgggtcaacgtggtggatcagtattatcaaccgtttgccaaggaaattgattccgcg
gaagaaaagattcaaaaggtccagatcaaggatgaacccgccggcttcaactgcgatatc
tgcggcgcgccgatggtcattaaactaggccgctatggcaaattttacgcgtgcagccgc
ttcccgaactgccgcaacacgaaaccgatcgtcaaagagatcggcgtcatttgtcccaag
tgcggcattggccaagtggtggaacgcaagtccaagcgtaaccgcttattttacggctgt
tcccgctatccggattgcgactttgtttcctgggataagccggtcggccgggactgccca
gtctgcggccacttcttagtggataagaaagtcaaaggcggccgccaggtgcagtgcccg
aatggcgattacgatgaaccgattcagaagtaa
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