Schleiferilactobacillus harbinensis: D1010_10235
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Entry
D1010_10235 CDS
T06855
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhb
Schleiferilactobacillus harbinensis
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhb03016
]
D1010_10235 (truB)
Enzymes [BR:
lhb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D1010_10235 (truB)
Transfer RNA biogenesis [BR:
lhb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D1010_10235 (truB)
Prokaryotic type
D1010_10235 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
T3S_SPI-1_N0
Motif
Other DBs
NCBI-ProteinID:
QFR25234
UniProt:
A0A5P8MA90
LinkDB
All DBs
Position
complement(1976626..1977543)
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AA seq
305 aa
AA seq
DB search
MNGFIPLHKEAGMTSFDCVAAVRKLAHQKRVGHGGTLDPDVDGVLPICLGVATKLVDRLQ
TMPKTYTGEITLGFATDTEDLSGKEIARQRLTAPFTALAIDQAMASFQGAYDQTPPLYSA
VRVNGKHLYEYARAGETVARPTRTVHVYHFDRTSAPVFNEEKGEQIFSFTAQVAKGTYIR
TLASDLGQRLGVPAVMSQLTRQASGGFQLAESVTLADLAAAPLTDFVQPIQAVFANMPIE
DLTPAAWTRVQHGNYLRLTRPATDGNELFLRYGGDIQAIYRYETLTGTWRAAQMLLHETT
GKEAE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atcaacggctttatccccttgcataaggaagcagggatgacgagttttgattgtgtggca
gcggtgcgcaagctcgcccaccagaagcgggtggggcatgggggcaccctggatccggat
gtggatggggtgctgccgatttgtttaggggtcgccacgaagctggtggatcggctgcaa
accatgcccaagacctacacgggtgaaatcactctgggcttcgcgacggataccgaggat
ttgagcggaaaagaaattgcccgccaacggctgacggcgccgtttaccgcgctggccatt
gatcaggcaatggcctcttttcagggcgcttacgatcaaaccccgccgttatattccgct
gtgcgggtcaatggcaaacatctctatgaatacgcccgggctggcgagacggtggctcgg
ccgacgcggacggtgcatgtgtatcatttcgaccgcacgagcgcccctgtctttaatgaa
gaaaaaggggagcagattttttcattcacagcacaagtcgcgaaggggacatatatccgg
acgctggcctccgatttgggccagcggctgggcgtgccggcggtgatgagtcaattgact
cgtcaggccagcggcggctttcaattggccgaaagcgtcacattggccgacttggcggcc
gcacccttgaccgattttgtgcagccgatccaggcggtgtttgcgaacatgccgattgaa
gacttgaccccggcagcctggacccgggtccagcatggcaattacctgcgcttaacccgt
cctgcgaccgatggcaatgagctgtttcttcggtatggtggggacattcaggcgatttac
cgctatgagaccctgaccggcacctggcgggcggcccaaatgctgctgcatgaaacaacg
ggaaaggaggcggagtga
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