KEGG   Schleiferilactobacillus harbinensis: D1010_10290
Entry
D1010_10290       CDS       T06855                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lhb  Schleiferilactobacillus harbinensis
Pathway
lhb03030  DNA replication
lhb03430  Mismatch repair
lhb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lhb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1010_10290
   03430 Mismatch repair
    D1010_10290
   03440 Homologous recombination
    D1010_10290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lhb03032]
    D1010_10290
   03400 DNA repair and recombination proteins [BR:lhb03400]
    D1010_10290
Enzymes [BR:lhb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1010_10290
DNA replication proteins [BR:lhb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D1010_10290
DNA repair and recombination proteins [BR:lhb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D1010_10290
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon RNase_H_2 HHH_3 YhfH Zn-ribbon_8 DUF6120 DEDDh_C
Other DBs
NCBI-ProteinID: QFR23759
UniProt: A0A5P8M5K6
LinkDB
Position
complement(1989158..1993483)
AA seq 1441 aa
MALSPEEMLTQLLDQIHFAVSADGGDRFAGGAVEKVIVHEQTKQWEFVLRLPQILPFSVY
SVFLADLTKAFADIASVAVRLHVAQPEFDDHLLADYWPYVVKTCAASSPALAQVNAPQMQ
GDRVAISVDNEVVKNYVVENALSCVEEAYARLGFPDFHIHVYVDESATQEKIDAMRQQQE
QQNQELATQALLKAQEKAAAGPAGNGSGAPSSDGVHIGKPIPADAPIRQMADITEPDRSL
VVQGKIFSSEVRDLRSGKQMLLFEITDYTSSFKVKAFSRETGTDPNFAQVAVGQWVKVRG
PVEEDKYSQELTISAYDVQTMAHAARQDTAAGDKRIELHLHTTMSQMDATNSPTDYVNQA
AQWGMPAIAVTDHAVAQAFPEAHSAGLKNKIKVMYGVEINLVDDATPIAYNLRDQPLTGD
EEYVVFDIETTGLSAPTDRIIEIGAVKMKNNKVLAKFDEFINPGFPLSATTINLTTITDE
MVQSGGSEEEIIKKFTDFVGDAIVVGHNVTFDIGFINVARKRLGWPAVPNPIVDTLIMSR
TLHPERGRHTLDSLSRVYKITLTQHHRASDDSEATGYLYFALLKEMMARFNTANVNQLND
HAGEKEAWKTGRPSHAILIAKTQAGLKNLFKIVSFSLTDYFHRVARVPRSMLNKYREGII
VGSGCADGEVFTAMMQKGYEDARKLAEYYDYLEVQPHAAYQPLIATELIKDNDQLEDLLK
NMVKLGKELDKPVVATGDVHFMNPEDAIYREILQRSMKINAHRKLYFPDLHFRTTDEMLT
DFAFLGEETAHQVVVDNTHTVADWVADDITPVKDKLYTPHMPGAEEDIRRLTMTQAKEWY
GDPLPDIVQARLDKELKSIIGNGFSVIYLIAQKLVHKSNKDGYLVGSRGSVGSSLVATMT
GITEVNPLPPHYRCPHCHYSEFFDKGEVGSGFDLPDKKCPKCGTELIKEGQDIPFETFLG
FKGDKVPDIDLNFSGDYQPIAHNYTKVLFGEDYVYRAGTIGTVAEKTAYGYVLHYQEVTE
QKIRGAEIDRLAAGCTGVKRTTGQHPAGIIVVPDDMDIYDFTPIQYPADDTDAAWKTTHF
DFHSIHDNILKLDILGHDDPTMIRTLQDLSGVDPKTIPYDDPGVMGLFSGTEPLGVTEDQ
IQSKTGTLGIPEFGTRFVRGMLEETHPTTFAELLQISGLSHGTDVWLGNAEELIQKGVVK
LKDVIGCRDNIMMDLIHWGLDSQLAFQIMEHVRKGRGIPDEWQDKMRENKNIPSWYIDSC
LKIKYMFPKAHATAYIEMALRIAWFKVYYPLAYYCAYFSVRADDYDLVAMTHGKETIKEA
MQTINDKGNDATAKEKGLLTVLEIANECWERGIRIQMVDINQSEAQEFKIVDDHTLLAPF
NAIPSLGDRVAKNIVAARAEKPFLSKEDISVRGGVSKTIMEYLDKNGVVNDFPDENQLSL
F
NT seq 4326 nt   +upstreamnt  +downstreamnt
ttggcattgtcacctgaagaaatgttgacccaactcctcgaccagatccactttgcggtc
tccgccgatggcggggaccgttttgctggcggcgccgtggagaaggtcattgtgcatgaa
cagaccaaacagtgggaattcgtgctgcgtttgccccaaatcctgccattctctgtgtat
agtgtcttcctcgctgatctgaccaaagcgtttgcggatatcgcgtccgtggcggttcgg
ctgcacgtggcccaacccgaatttgacgaccatttgctggctgattattggccatacgtg
gtgaaaacctgtgccgcctcgtcccctgccctggcccaagtgaatgccccgcaaatgcag
ggcgaccgggtggcgatcagtgtcgacaacgaagtagtcaaaaattatgtcgtggaaaac
gcactgagctgtgttgaagaagcctatgcccggttgggcttcccggatttccatatccac
gtctacgttgatgagtctgcgacccaagaaaaaatcgacgccatgcgccagcagcaggag
cagcaaaaccaagagctggcgacgcaagctctgctgaaggcccaggaaaaggccgcggcc
gggccggctggtaacggcagtggggcccccagcagcgatggtgtccacatcggtaagccg
attcccgccgacgcgccgattcgccagatggcggatatcaccgaaccagaccggtccctg
gtggttcaggggaagattttctccagtgaagttcgggatctgcgcagcggcaaacaaatg
ctgctgtttgaaatcactgattacacctcttccttcaaggtcaaggccttctcccgggaa
accggcaccgatccgaattttgcgcaagtggctgtcggccaatgggtgaaagtccgcgga
ccggtggaagaggataaatattcccaagaattgaccatcagtgcctacgatgttcagacg
atggcccacgcggcgcggcaagataccgctgcgggggataaacgtatcgaactccatctg
cacaccacgatgtcccagatggacgctactaattctcccaccgattacgtcaaccaagcg
gcgcagtggggcatgccggcgattgccgttactgatcacgccgtcgcccaggcattcccg
gaagcccactcggcgggcttgaagaataagattaaagtcatgtacggggtggaaatcaac
ctggtagatgatgccacgccaatcgcctacaatttgcgcgatcaaccgcttaccggtgat
gaagaatatgttgtattcgatattgaaaccaccgggttgtccgcacccaccgatcggatc
attgaaattggcgcggtgaagatgaagaacaacaaggtgttggcgaaattcgatgaattc
atcaaccccggctttccgttaagtgcgacgacgatcaatttgaccacgatcaccgacgag
atggtccaaagcggcgggtctgaggaagaaattatcaaaaaattcaccgactttgtgggt
gacgcgattgtcgtcggccacaatgtcaccttcgatatcggcttcatcaacgtcgcccgc
aagcgcttaggctggccggcggtacccaatcccatcgtcgacacgctgatcatgtcccgc
accctgcatccagaacggggccggcacaccctggacagcctgtcgcgggtgtataagatc
actttgacccagcaccaccgggcctctgacgattcggaagcgaccggctatttgtatttt
gctttgctgaaagaaatgatggcccgcttcaataccgccaatgtcaatcagctgaatgat
cacgcgggtgaaaaagaagcctggaagaccggccggcccagccacgctattttgattgcg
aaaacccaagccggcttgaagaatctgttcaagatcgtgtccttctctttgacggattat
ttccaccgggtggcccgcgtcccccgcagtatgcttaacaagtaccgggaaggaatcatt
gtcggcagcggctgtgcagacggcgaagtgttcaccgccatgatgcaaaaggggtatgaa
gatgcccgcaaattggccgagtattacgattatctggaagtccagccccatgcagcttac
cagccactgatcgccacggaattgatcaaggacaacgaccagctggaagacttgctgaag
aacatggtgaaactcggcaaagaattggacaaaccggtggtggccaccggtgatgtgcat
ttcatgaacccggaagacgccatctaccgggagattttgcagcggtcgatgaagatcaac
gcccaccgcaagctgtatttcccggatctgcacttccggactacggatgaaatgctgaca
gactttgcttttctgggcgaggaaacagctcatcaggtcgtcgttgataacacccatacg
gtggccgattgggttgctgacgacattaccccggtgaaggacaagctgtatacgccgcat
atgcccggcgcggaagaagatatccgccgactgaccatgacccaggctaaagaatggtac
ggcgatccgctgccggatattgtccaggcccgcttggataaggaacttaagagtatcatc
ggcaacggcttctcggtcatctacctgattgcccagaaactggtgcacaagtccaataag
gacgggtacttggttggttcccggggcagtgtcggctcctctctggtcgcgactatgacc
gggatcaccgaagttaatccgctgccgccccattatcgctgtccgcactgccactactca
gaattcttcgataagggggaagtcggctccgggtttgacttgccggataagaaatgcccc
aagtgcggcacggaattgatcaaagagggccaggatattcccttcgaaactttcttaggg
ttcaaaggggacaaggtacccgatatcgatctgaacttctccggggactatcagcccatc
gcccataactacaccaaggtgctgttcggcgaggactacgtgtaccgggccgggaccatc
ggcacggtggcggagaagaccgcctacggctatgtcctgcattaccaggaagtcacggaa
caaaagatccgcggcgccgagattgatcggttggcggcgggctgtaccggggtcaaacgg
accaccggccagcacccggcggggatcatcgtcgtgccggacgacatggacatctacgat
ttcaccccgatccagtaccccgcagatgatacggacgctgcctggaagacgacccacttt
gatttccactccatccacgataatatcttgaagctggatattctgggccacgatgacccg
accatgatccggaccttgcaagatctttcgggggtcgacccgaagacaattccttacgac
gatccaggtgtgatgggcctgttttccggtactgaaccgctgggcgtcacggaggaccag
attcaatcaaagaccggtaccctggggattcccgaatttgggacccgcttcgttcgggga
atgctggaagaaacccatccgacgacatttgctgaattgcttcagatttctggtctgtcc
cacgggaccgatgtctggctgggtaacgccgaggagttgatccaaaagggcgtcgtcaag
ctgaaggatgtcatcggctgtcgggataacatcatgatggacttgattcactggggcctg
gattcccagttggccttccagatcatggagcacgtccggaagggccgggggatccccgac
gagtggcaggataagatgcgggagaataagaacattccttcctggtacattgattcctgt
ttgaagatcaagtacatgttccccaaggcccacgccactgcctatattgaaatggcgctg
cggattgcctggttcaaagtgtactatccgttggcatactattgtgcctacttctccgtg
cgggccgacgactatgacctggttgccatgacccacggcaaggagaccattaaagaagcg
atgcagacaatcaacgacaaaggcaacgacgcgacagccaaggaaaagggcctgctgaca
gtgctggagattgccaacgagtgctgggagcggggcatccgcatccagatggtggacatc
aatcagtctgaagcccaagagtttaagatcgtcgatgatcacacactgctggccccgttc
aacgcgatcccttccctcggggaccgggtggccaagaatattgtcgctgcccgggcagaa
aaaccgttcctgtcgaaagaagatatttccgttcgcggcggggtttccaaaacgataatg
gaatatctggacaagaatggcgtcgtcaacgacttcccagacgaaaatcagctgtctctg
ttctaa

DBGET integrated database retrieval system