Schleiferilactobacillus harbinensis: D1010_11095
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Entry
D1010_11095 CDS
T06855
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lhb
Schleiferilactobacillus harbinensis
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhb03019
]
D1010_11095
Messenger RNA biogenesis [BR:
lhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D1010_11095
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
HDOD
DUF7541
Motif
Other DBs
NCBI-ProteinID:
QFR23902
UniProt:
A0A5P8M5X2
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All DBs
Position
2140494..2141456
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AA seq
320 aa
AA seq
DB search
MFKEVKNGRQFAGQAIIQGITVKAAKNGSQYADANLTNHDETVPVKIWEIQPDSIMTYNN
KAIDFTATRSDYNGKLQFVLDSFSINPTLQLRDLLPASYWDNAQLKEGFNHFLMKITDPI
YQHLVRTLYNDTDDAIIDKLSEMPAAIRMHHAFIGGLYTHTLSMAYEAEGILTHTIYAKT
INQSLLYAGILLHDLGKAFCYTNATDHTATKQANLLEHVAIIDGMIVDYARNTLHLNYAA
SLNDEHILNLRHLVLSHHGKLEYGAAIKPAIPEAMLLHHVDDLDAHMEMMRMAESDLKPG
TVADQRNFGLDGAFVYHSTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagaagtcaagaatgggcggcagtttgccggccaggccatcatccaaggaatt
accgtcaaggcggccaagaacggctcgcaatacgccgacgccaatctcaccaaccacgac
gaaacagtgccggtgaaaatctgggagattcagccggactcaatcatgacctacaacaac
aaagccattgattttacggcaacgcgctctgattacaacggcaagctgcaattcgttctg
gattctttctctattaatccgactttgcaattgcgggacttgctgccggcaagttattgg
gacaatgcccaattgaaggaaggcttcaaccatttcctgatgaagatcaccgacccgatt
tatcagcatctggtgcgcacgttatacaacgacacagacgatgccatcatcgataaactg
agcgaaatgccggccgcgattcggatgcaccacgctttcattggcggactgtatacccac
accctgtccatggcttatgaagccgagggaattttgacccacacgatttatgccaagacc
atcaaccagtccctgctctacgctggcattctgcttcatgatttgggcaaagccttctgc
tacaccaacgccaccgaccacacagccaccaagcaggccaacctgctggaacacgtcgct
atcatcgatggcatgatcgtggactacgcccgcaatacattgcacttgaactacgccgcc
agtcttaacgacgaacatattctcaacctgcgccacctcgtcctctcgcaccacggcaaa
ctcgaatacggcgccgccatcaaacccgccattcccgaagccatgcttctccatcatgtc
gacgacctcgacgcccacatggaaatgatgcgcatggccgaaagcgacctcaaacccggc
accgtcgccgaccaacgcaacttcggcctcgacggcgcgttcgtttatcattccacgttg
taa
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