Lactobacillus helveticus KLDS1.8701: HUO_09365 Help Entry HUO_09365         CDS       T03777                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lhd  Lactobacillus helveticus KLDS1.8701 Pathway lhd03030   DNA replication lhd03410   Base excision repair lhd03420   Nucleotide excision repair lhd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lhd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HUO_09365    03410 Base excision repair     HUO_09365    03420 Nucleotide excision repair     HUO_09365    03430 Mismatch repair     HUO_09365  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lhd03032]     HUO_09365    03400 DNA repair and recombination proteins [BR:lhd03400]     HUO_09365 Enzymes [BR:lhd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HUO_09365 DNA replication proteins [BR:lhd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HUO_09365 DNA repair and recombination proteins [BR:lhd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HUO_09365    NER (nucleotide excision repair)     GGR (global genome repair) factors      HUO_09365    MMR (mismatch excision repair)     DNA ligase      HUO_09365   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HUO_09365 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT Nlig-Ia Zn_ribbon_NUD RNA_pol_A_CTD bCoV_SUD_C DUF4796_N Motif Other DBs NCBI-ProteinID:  AJY61972 UniProt:  A0AAJ4CX28 LinkDB All DBs Position complement(1819130..1821136) Genome browser AA seq 668 aa AA seqDB search MAKITLDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTP DSITQRVGGEIDSDFTKVNHPIPMLSMGDVFSKDELKEFDQRMQKLVGHPVEYNVELKID GLSLSLEYQDGKLVRASTRGNGYIGEDVTANARYIADIPQVLPEPLTIEVRGECYMGKEA FAKLNQEREDEGLSVFANPRNAAAGSLRQLDPKVTKKRQLSTFIYTWVNPPREITSQHQA IERMHELGFHTNETGRKLANLDEVFDFIDEYTAKRNSLTYGIDGIVLKVDDLSLEQQLGN TVKVPRWEIAYKFPPEEQETIVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHNPD YLNEKGVRIGDTVKLHKAGDIIPEISEVVLSKRPADSVPYEIPTTCPSCGQKLVHLEDEV ALRCINPSCPAQVEEGIIHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTEDDLA QLDHFKEKSINNLLTAIDNSKKNSVELLITGLGIDHVGAKAARLIAQKFKNLEKIMSLGV QDIASIDTIGMTTAESMTTYFAQPEAQKLIEELRESGLNMDYLGADEPEEAPDNPFKDKT VVLTGKLEHYTRSEFTKKLQALGAKVTGSVSHKTDYVIYGKDAGSKYNKAEQLGVPLLTE EEAIAQIE NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt atggctaagattactcttgatgaagctaaaaaagaagcagcttctcttagaaccaagcta gatgaatgggccgatgcgtattattcaaaagatgcgcctgaagttgaagataatgtttat gatcaaagttataatcgattacttgaactagaaaaagctttccctgaaattgttacgcct gattcaattactcagcgtgtaggtggagaaatcgatagtgattttacaaaggttaaccac ccaattcctatgctttcaatgggggatgtcttttcaaaagacgaactcaaggaatttgac caaagaatgcaaaagttggttggtcatcctgttgaatataatgtcgagttaaagatcgat ggtttatccttgtctcttgaatatcaagatggcaaattggttcgcgcttcaactcgaggc aatggttatattggtgaagacgtaacggctaatgcgcgttacattgcggatattccccaa gttttgccggagcctttgactattgaagttcgcggtgaatgttacatgggaaaagaagct tttgccaagttgaatcaagagcgtgaagatgaaggtttgagcgtgtttgctaatccacgt aacgctgctgccggttcacttcgtcagcttgatcctaaggttactaaaaagcggcaactg agtacctttatttatacatgggttaatccaccacgcgagattaccagtcagcaccaagca attgagcgcatgcatgaattgggttttcatactaatgaaactggtcgtaaattggctaat cttgatgaagtatttgattttatcgacgaatacacggctaagcgtaatagcttaacttat ggcattgatggtattgttttaaaagttgatgatttaagccttgaacagcaattagggaac accgtgaaggtgccacgctgggaaattgcttataagtttccaccagaagagcaagaaaca attgtgcgtgatatcgtttggacggtaggtcgtaccggtgttgtaacacctacggcggtg atggatcctgttcaattagcagggacaacagttgccagagcttcattacacaatccagat tacttaaatgaaaaaggcgttagaatcggggacaccgttaagcttcataaagctggcgat attattcctgaaatttctgaagtagttttatcaaagagacctgcagattctgttccttat gagattcctactacttgcccatcctgtggacaaaaattagttcacttagaagatgaagta gccttacgctgcattaatccatcatgtccagctcaagttgaagaaggaattatccacttt gcttctcgtcctgcgatgaatattgcgggcttaggtccaaaaattgttaaacaattaatt gctaaggatttagtacataatgttgctgatctataccatttaacagaagatgatttagct cagcttgatcactttaaagaaaagtctattaacaatttgttaacggcaattgataattcg aaaaaaaattctgttgaattattgattactggcttaggaattgaccatgttggagctaaa gcagctcgtttaattgcacaaaagtttaaaaatctggaaaagattatgtccttaggggtg caagatattgcttcaatcgatacaataggcatgacgactgcagaatcaatgacaacatat tttgctcaacccgaagcacaaaaattaattgaagaattaagagaaagtggtcttaatatg gattacttgggtgcagatgaaccagaagaagcaccagataatccatttaaagataaaact gttgttttaaccggtaagttagagcattatacaagaagcgaatttactaagaaattgcaa gctttaggtgctaaggttacaggatctgtatcacataaaactgattacgtaatttatggc aaagatgctggatctaagtataataaggctgagcaattaggggtaccacttctgactgaa gaagaggcaatcgcacagattgaataa

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