Lacticaseibacillus huelsenbergensis: LHUE1_002539
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Entry
LHUE1_002539 CDS
T09416
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHUE1_002539 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_002539 (nth)
Enzymes [BR:
lhn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LHUE1_002539 (nth)
DNA repair and recombination proteins [BR:
lhn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LHUE1_002539 (nth)
Prokaryotic type
LHUE1_002539 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
WFB38988
UniProt:
A0ABY8DRX9
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All DBs
Position
complement(2749918..2750571)
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AA seq
217 aa
AA seq
DB search
MTDVEARQLFNQIMALYPDPEPTLHAANPFEILVAVMLSAQTTDIAVNAVTPALFAAYPT
PEAMAAAPVTDIAEKISRLGLYRTKAAHLKALSAILVQSYGGKVPADAADLVKLPGVGKK
TATVVLSDAFGIPGVAVDTHVSRIVKGLGLVSPKATPVQIQKRLEALMPKSTWIKLHRSL
IRFGREHLRARDPKIPAGSEWSFLAQHYAPLKEAAKH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgtagaggctaggcaattgtttaaccaaatcatggcactatatcctgatccc
gaaccgacattgcacgcagcgaacccttttgaaattctggttgcggtgatgctgtcggcg
caaacgacagatattgccgtcaatgctgtcaccccggcattgtttgcggcttatccaact
ccggaagcaatggccgctgcgccggtgacggatattgccgaaaaaatcagccgactcggg
ttgtaccggacgaaagcagcccatttaaaggcattaagtgccattttggttcagtcatat
ggcggcaaggttccagctgacgcagctgatttggttaagctgccaggggtcggcaagaaa
acggcgacagtcgtacttagcgatgcgttcggcattcctggcgtggccgtcgatacacat
gtcagtcggattgtgaaggggttgggattagtttcgcctaaggccacaccagttcagatt
cagaagcgactggaagcattaatgccgaagtctacctggatcaagttgcaccgcagcctg
attcgttttggtcgcgagcatttacgcgcccgcgacccaaaaataccggccggttccgaa
tggtcatttttagcacagcattacgcgccgcttaaggaggcagctaagcattga
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