KEGG   Linepithema humile (Argentine ant): 105668230
Entry
105668230         CDS       T04898                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18-like isoform X1
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
lhu  Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lhu04121]
    105668230
   03400 DNA repair and recombination proteins [BR:lhu03400]
    105668230
Enzymes [BR:lhu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105668230
Ubiquitin system [BR:lhu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105668230
DNA repair and recombination proteins [BR:lhu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    105668230
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 SAP zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_6 UBZ_FAAP20 zf-RING_5 RING_XB3-XBAT31 zf-rbx1 U-box Sgf11
Other DBs
NCBI-GeneID: 105668230
NCBI-ProteinID: XP_012215895
LinkDB
Position
7:3963820..3967133
AA seq 689 aa
MWPIQYVELKLIDEFLQCGICYEYMDTSVMTLCSHNYCSLCIRKYLHYKTQCPICLEETF
EKDLRKNKILDEIISQYLNVKEKLLKKFHLEETLKVKDKNFEEKETGNVCSLNNSEYKKK
QDVFDTSKILHKSSDSPVHKNSNITPHGKKDYQDVSTPSTSTERRIPLMFTPKSTKGFPN
DENCQIVTCPVCKVDVSQNNINKHLDQCLKRENAKDQPKKSESKRKPLPKLVLNLMKDNA
IKKKLKELGLSSQGDRKVLESRLQRYIILYNAECDKINPRPISELIRQFEEEENLEKKVQ
KPSNRLNVNRNTEQNVIEQQRKKYLAVNKDSFDHLIAKIKHADSPQKLSIRRKIFSKENP
DDSHESHITENDSTIRDNEKSNFLSPNSANPYIEDSDSNATCPLQIYSSTDPMKFLTVEL
ASSSNDSTEQSAFIQETPKRRRKTNPVSFNFIVKTEESLENTLIHEKIISSNSRECNFSE
DRMDTDTIESVSKYTRIELENRERQVNSSAENSRSGLKYSPEKYIGDSESRDSSQRELCN
KDTDSIVQDIESFVGDNESAEDDHNLVVTERLKQEQLHDAKKEYVSDCTKFEKENVESLD
ETIKVFRKREREVTFISSDEEKAEEKSMNTRKSLRLGLTEAKGFNNGNIYEKTRNEENSQ
SKKKQTRGTCAKSTRNCTKKSVRLRNKMS
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgtggccaatccaatatgtggagttgaagcttattgatgagtttttacaatgtggaata
tgttatgaatacatggatactagtgtgatgactttgtgctctcacaattattgttccctc
tgtattagaaagtatctgcattataagacacaatgtccaatttgcttggaagaaacattc
gaaaaagatttaagaaagaataagattttggatgaaattatctctcaatatttgaatgtt
aaagaaaaactcttgaagaaatttcatcttgaagagacactaaaagtgaaagataaaaac
tttgaggaaaaagagactggaaatgtgtgctccttaaataattcagaatataagaagaaa
caagatgtttttgatacaagcaagatattgcataaaagttctgatagcccagtacataag
aatagtaatattacacctcatggaaaaaaggattatcaggatgtatccactcctagcact
agtacagaacgtaggatacctctaatgtttacaccaaagagtacgaaaggttttccaaat
gatgaaaactgtcaaatagtaacatgtccagtgtgcaaagtagatgtgtcccaaaataat
ataaataaacatttggatcagtgtttaaaaagggaaaatgcaaaagatcagcctaaaaaa
agtgagtcaaagcgtaaacccttgccaaagttagtgctaaatttaatgaaagataatgcc
ataaagaaaaaacttaaagaattaggcttatcatctcaaggagatcgaaaagtattagaa
agcagattgcaaagatatattattctttataatgcagaatgtgacaaaataaatccaagg
cctatatcagaattaattagacaatttgaagaagaagagaatttggaaaagaaagtacaa
aaaccatcaaatagattgaatgtcaaccgaaatacggaacagaatgttatagaacaacaa
agaaaaaaatatttggctgtaaataaagatagctttgaccatttaattgcaaaaataaaa
catgccgatagtccgcaaaaattatctatcaggcgcaagatatttagcaaagaaaatcct
gatgattcacatgaaagtcatattacagaaaacgattcgactattagagataacgaaaaa
agtaatttcttatcaccgaattctgccaatccttatattgaagattcagattcgaatgca
acttgtcctctacaaatatattctagcacagatcctatgaaatttttgacagtagaattg
gcttcttcatctaatgattctaccgagcaatctgctttcattcaagagactccaaagcgt
cgacgtaaaaccaatccagtttcattcaattttattgtaaagacagaagaatctctcgaa
aatactttaatacatgaaaagataatttctagtaactcaagagagtgtaacttttcggag
gacagaatggatactgatactatagaatcagtttccaagtatactagaatagaattggag
aatagagagcgacaagtcaattcatccgcggaaaacagcagaagtggcttgaagtatagt
ccagagaaatatattggagattccgaatctagagatagttcgcaaagggaattatgcaat
aaagatacagattcaattgtacaagacatcgagagtttcgtaggagacaatgaaagtgct
gaagatgatcataatttagttgttacagagagattaaagcaggagcaattacatgacgcg
aaaaaggaatatgtgtccgattgcacaaaatttgagaaagaaaatgtggaatcactggat
gaaactataaaagtttttcgaaaacgagagcgtgaagtgacgtttatatcaagtgacgag
gaaaaagctgaagagaaatcgatgaataccagaaaatcacttagacttggccttaccgaa
gctaagggattcaacaatggaaatatctatgagaaaacgaggaatgaagaaaattcgcaa
agtaaaaagaagcagactcgtgggacatgtgcgaagagtacacgaaattgtacaaagaaa
tctgttagattgagaaataaaatgtcttag

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