Linepithema humile (Argentine ant): 105678188
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Entry
105678188 CDS
T04898
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105678188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105678188
Spliceosome [BR:
lhu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105678188
Complex C
U5 SnRNP specific factors
105678188
SSDB
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Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
105678188
NCBI-ProteinID:
XP_012232738
LinkDB
All DBs
Position
1:44231232..44239167
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AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYGNVGDDAEDRDRSDEEMEEDKDELREQGEQGSS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKPKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVQQTHPYLHNVTDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAILIVDAAE
GVMLNTERLLKHALQEKLALTICINKIDRLVLELKLPPTDAYYKLRHIIEEINGLIALYS
DTENPTFVSPAVGNVCFASSEYNVCFTLKSFAALYARNYPGLNANEFAKRLWGDIHFNPK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVTHVPSPLAHAPAKVQHVYTGPIDSPLAQDMVNCDPDG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDPNNSEELHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVRITWNKK
RLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSARDAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatctatatgatgagtttggaaattatattggtcctgatttggcatcagag
agtgaagatgaaaatgaatatggtaatgttggtgacgatgccgaggacagagatcgatct
gatgaagaaatggaagaagataaggatgagttacgagagcaaggagaacaaggatcttct
atggcagttgtattacatgaagataaacgatattatccgagtgcattagaagtatatgga
cctgaggtagaaacacttgtgcaagaagaagatgcccaaccattagataaaccattgata
gcacctaccagaaaaccaaagtttcaaataaagcaacaacagcttcctgaaacaacatac
agcattgaatttttagcggatatgatggatgcgccgcatctaattagaaatgtggttttg
ctaggtcatttgcatcatggcaaaaccactttggtcgattgtttggtacaacaaacgcat
ccttatttacacaatgtaaccgatgaaaaacctttaaggtatacagatacgttgtttacc
gagcaacagagaggcgtttccacaaaagctactcccgtcactcttctgttacaagacgtc
aaatctaaatcatatcttttgaacatatttgatacaccaggccatgtgaatttctccgac
gaggctacagccgcaatacgcctgtcagacggtgcgatattaattgtcgacgcggcggag
ggtgtaatgctgaacaccgaacgtctgctgaaacatgcgctccaagaaaagctcgcttta
acaatctgtataaacaagatagatcgtttagtcttggagttgaaacttccgcctactgat
gcctactacaagctgcggcatatcattgaggaaatcaatggattgatagcattatactcg
gacaccgagaatcctacctttgtttcaccggctgtcggaaatgtctgcttcgccagttcg
gagtacaatgtgtgctttactctaaaatcgtttgccgcactctatgccaggaactatcct
ggtcttaacgccaatgaattcgccaaacgactctggggcgatattcatttcaatcctaag
acgcgaaagttcaccaaaaagccgccacataatacggcacaacgaagtttcattgaattc
atcttggagcctttatataagatattcgcacaggttgttggcgatgtggatacaacgtta
cccgatgttctggatgagctcggtatacgattaacctctgaagagatgaagatgaatata
cgaccactattgagactcgtttgcacgcgatttctgggagatatgtgcggattagtcgac
atgtgtgtcactcatgtacctagtccactagcgcacgctccggctaaagtacagcacgtt
tatacgggtccaattgattcgccactcgcgcaagacatggtcaactgtgatccggacgga
agattgatgattcacagtacgaagatgtatccgactgaagattgtactctattcgtggta
cttggcagagtaatgtccggtacattggaagcgggacagcgcgttcgcgtgttaggcgaa
gcgtattcgcgcacggacgaagaagattcacgcgttctcacagtgggcagattgtggatc
agtgaagcgcgttattccatcgaactaagtcgagtacctgcgggcaattgggtcctcatt
gagggtattgatcgccctattgtaaaaaccagcaccatcacggatcccaataattcggaa
gagttgcatatctttcgtccgctcaaattcaacacgcagagtgtgatcaaaatcgccgtt
gagccagtcaatccgtccgagctgccgaagatgttggacgggttgcgaaaggtaaacaaa
agttatcctttattaggaacacgggtggaagagagcggcgagcacgtcgtgctgggaact
ggtgaactttatcttgactgcgcgatgcacgatcttcgtcgcatgtattccgaaattgac
ataaaagtggccgacccagtagtcgccttcgcagaaactgtagtggagaccagctctctc
aaatgcttcgctgaaacacctaataaacgaaataaactgacaatgatagcggagccgctg
gaaaggggtcttgctgaagatatagaggcggagcatgtgcgcatcacgtggaacaagaag
agattgggagaattcttccaaacaaagtatgattgggatttattggcagctcgaagcata
tgggcattcgggcctgattctacaggacctaacattctagtggatgatactttaccttcc
gaagtagataaaacactgttaaatagtgcgcgtgatgccattattcagggctttcaatgg
ggaacacgcgaaggaccgttgtgcgaagagccgattcggaatgtcaaattcaagatcctt
gacgcagtcatcgcgcaggaaccgctacatcgaggaggtggtcaaattattcctaccgct
cgacgtgtcgcatattctgctttccttatggcgactccgcgactgatggagccatacctg
tttgtcgaggtacaagcgcctgcagattgcgtatccgccgtttacacggtattggcgaaa
cggcgaggtcacgtgacgcaggacgctccggttccgggtagtccgttgtacacgattaaa
gcgtttataccagcgattgacagtttcggcttcgagacagatctccgaacgcatactcaa
ggacaagcgttctgcctgtctgtgtttcaccattggcaaatcgtgcctggagatcctcta
gacaaaagcatcaccatcagaccattggaaccgcaaccggccactcacttggccagagag
ttcatgctgaagacacgaagacgcaagggtttgtccgaggatgtgtcgatcaataaattc
ttcgacgatcccatgttactcgaattggctcggcaggatgtgctgctaaattatcccctt
taa
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