Linepithema humile (Argentine ant): 105679600
Help
Entry
105679600 CDS
T04898
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03440
Homologous recombination
lhu03460
Fanconi anemia pathway
lhu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105679600
09124 Replication and repair
03440 Homologous recombination
105679600
03460 Fanconi anemia pathway
105679600
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lhu01009
]
105679600
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105679600
03036 Chromosome and associated proteins [BR:
lhu03036
]
105679600
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105679600
Enzymes [BR:
lhu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105679600
Protein phosphatases and associated proteins [BR:
lhu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105679600
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105679600
Multi subunit type E3
BRCC complex
105679600
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105679600
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105679600
BRCA1-A complex
105679600
BRCA1-B complex
105679600
BRCA1-C complex
105679600
BRCA complex
105679600
FA (Fanconi anemia) pathway
Downstream FA components
105679600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
RTT107_BRCT_5
zf-C3HC4_4
U-box
zf-RING_10
zf-RING_5
PTCB-BRCT
RING_XB3-XBAT31
Prok-RING_4
zf-RING_4
zf-Nse
zf-rbx1
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
105679600
NCBI-ProteinID:
XP_012235144
LinkDB
All DBs
Position
2:10139743..10149819
Genome browser
AA seq
1675 aa
AA seq
DB search
MSENFTSDIDRLYDAVNSIHKSLQCTICLELMIEPVKTRCGHSFCKLCAAEVLQKKSSFC
PLCKKKLDRRNISKDNHLQLCIEKFTALVSAIETDSHIDILSYSKRPHDTKESCSDTCVN
KNSRRLSSKTQSTHQSSERQIEKSFSSRETTINRGDQQFNSSLLNKKSISNAFSKVGFTD
DVNDMPEIKVRTWLHTLPDELLPLNKDDKVSMTGKTTSINQSEDDSKSDATSKTLKTFKM
RKNRKTSKKQSSVYIDEDDENASQTRKGLSQPKKGTRARQSGKVKTIDSSDIDSNKLKYV
GIHARVNSRERESRKKDATKPGVEETNNRENSTLTTATIEERDRSSLSAANTSSANWSGV
LEFGKEIRAKKKKIKKLNVSTEKSKKLPQLVENIKLSNQYDLSKIMLSGKTSRDQANVSN
LLKESIGREQDAADKSPNLSSIKTHLKASTETDARNEDVSFTKGKDINSTINLPIETSCI
TLEEGERIHIRHLNNDQVNQIIGIEDFQHAENQYREENVEFDVHPASLLSPRKRLTPAKL
NKSTGCKKITPTAAQASIRNSKNSADLTIEDRIAGLEENSSVKRTPEEVPFQSPLSGRLS
LRRKPDVSNNTNSPLFSQLSLADRVLLDRYESDASDCRNVDSRDKTQSTRMAAVRRHLNL
DAGDIVAGSAAPRSTRNQGHRFSVKFIQLGTLFRRSNVRYFYLYATKSERALRVKFDVGT
VCNMQQSISRQEMESDVAREALRDFVASANPSKDSQSFSNITVIENLHFADSVNANAAAV
PEDAKFFSAATTRKVSGTSTSRTDIDRDLSRKRITAVERSSMKASERSTESAGDAEKRSQ
KSLHTLRARSDNSTIRKTSRPYASSTNSVKLLSPDKDSQLKFLAIDSPTSKSEDSKASSI
RQQVAIKESNFAASTRVAAAQKSYCESSSKKRKRTRYAGDEGLFDDSDDSDVLFDVPTKL
KCSRSFHGEKSDLDANKKRRLNFSDDQISKVISNSEEQHAPKKIVPILDSDTESKLSANV
AENRKSHKFATSEIKESEVFESNSIFHSDNLDFMLQELMESNGSKTQKIANPSNDDIINR
VLQIDQPRSDPDARRSLSSAALNDRTSQSKKNSGDYLLQDNFDETIANIDLPQSEDMMSS
SEQPARNHSRTLVEQNTPNCPTMTDEPRDATQETPMISSTNDIFEHSSRNTKKLSARNAS
ENFDKENAISHVHKKRESMDDRGNKKGTTTKHFVDTIDKDFHREITKHNASHEKEKSFSR
AESLQTDKKHNVSTNSLSQLDENDTLMNVTQDQAHLQIFEQDLFSSPSTRKTTPKVASEN
DREVQRTPKRRKLNDRDENAAAEGRHAEEDDIVENTPERTRKSSESNIKTVESRKSTSHL
SAITITSGSSVYNMMPLCESTPKVARPAAIGQSKQETILSGSILLPKQTDGKTSENVRQL
SDRQQLCFVCTSLSKVQVSLVTELAAKHGANYVNQFDRNVTHVIVNTTGERNVARSTLKY
LQGIAHRKWIVSYRWVEDCLEREKLLDEGPYEATTFNDGVIGVKGPRNSRLREKDLFEGF
TFLCVKPYNNVSHSQYQDLLLATGATVVDSLEDLAKKGGMKGVVIQDNTHDIKTIERWYH
TAKAAPIIVEWIVECIGQYKLLKLASQYLSVEDFQAIGYPRELVEEYEEYSDDEN
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaactttacaagtgacatcgatcggctgtacgatgcggtcaacagcatccac
aaatctttgcagtgcacaatctgtttggaattgatgatagagcctgtgaagacaagatgt
ggccactccttctgtaagttgtgcgcagcagaggtcttgcagaagaaatcttcattttgt
ccattgtgtaagaaaaagctcgacagacgcaatatttccaaggataatcatttacagtta
tgcatagaaaaatttacagcacttgtctctgctatcgaaacagacagtcacattgacata
ttatcgtattcaaaacgaccgcatgatacgaaggaaagctgctccgatacatgcgttaac
aaaaactccagaagattatcatcgaaaacgcaatccactcatcaaagttcagaaagacaa
atagaaaaatcgttcagcagtcgagaaacgacgattaaccgtggtgatcagcaattcaat
tcgagcttgttaaacaaaaaatctatatcgaacgcattcagcaaagtaggttttaccgac
gatgtaaatgacatgccagaaatcaaagttcgtacgtggcttcataccttacccgatgaa
ctgctgcctttaaacaaagatgacaaagtatcgatgacaggcaaaactacgtcgatcaat
caatccgaagatgatagcaaatcagacgcgactagcaagacattaaagacatttaagatg
aggaagaatcgtaaaacaagtaaaaaacaaagttcggtatatattgacgaagacgacgaa
aatgcgtcccaaacgagaaaaggtttgtctcaaccaaagaaaggcacgagagcgaggcaa
tccggcaaagtaaagacaatcgattcgagcgatatcgattcgaacaaattaaagtacgtc
ggaattcacgctagagtaaattcacgcgagagggaaagtcggaagaaagacgcgacaaag
ccaggcgtcgaggagactaacaatcgggaaaactcgacattgacaacagcgacgatcgag
gaacgtgatcgttcgagcttgagcgcggcaaacacgagctctgcgaattggtccggcgtg
ctggaattcggaaaggagatacgcgcgaaaaagaagaaaataaagaaactaaacgtgagc
accgagaagagtaaaaagctgcctcagttagtggaaaatatcaagctgagcaatcaatac
gatttaagtaaaataatgctgagcggtaaaacgagtcgagatcaggcaaacgtatctaat
ctactaaaagagtcaattggtcgggaacaggatgcggctgataagagtccgaacttatca
agcataaaaactcacttgaaagcatcgactgaaacagatgctcgtaatgaagacgtatcg
tttaccaaaggcaaagacatcaactcgacgattaacttgccgatagaaacgtcgtgtatc
acgctggaagaaggcgaaaggatacacataaggcatttgaacaacgatcaggtaaaccaa
attatcggtatcgaggattttcaacatgccgaaaatcaatatcgcgaagagaatgtagaa
tttgacgttcatcctgcttcattactgtcgccgcggaaaagactgacgccggcgaaactc
aacaaatccacaggatgcaaaaaaataacgcccaccgccgcgcaagcttctatcagaaat
tctaaaaattcagcagacttaacgatcgaagatcgaattgccgggcttgaagagaacagc
agtgtgaaaaggacgccggaagaggttccttttcaatctccgttatcaggtagattatcg
ttgagaagaaaaccagatgttagcaataacacaaattcgccgctattcagccaactctca
ctggccgacagagtgctgcttgacagatatgaaagtgatgcgagtgactgcaggaacgtc
gattcgcgggacaaaacgcagtctactcgaatggcagctgtgagacgtcatttgaacttg
gacgctggcgatattgtcgccggatctgcggcgccaagaagcactaggaatcaaggacac
agattctctgtaaagttcatacaactgggtacattgttcagacgaagcaatgtaagatac
ttttacttgtacgcgacgaaaagtgaacgagcgctgagagtcaaatttgacgtcggcaca
gtatgcaacatgcagcaatcgatcagcaggcaggaaatggaatccgatgtcgcgcgtgaa
gcgttgcgcgacttcgtagcgtctgccaatccgtcgaaggactcgcaaagtttcagcaat
atcactgtaatagagaatctgcatttcgcggatagcgtgaacgcgaatgcggctgctgtc
ccggaagatgcaaagtttttctcggcagcgacaactcgcaaagtttcagggacttcgacg
tcgaggacggatatcgatcgtgatttaagtcgaaaaaggatcacggcggtcgagcgctct
tcaatgaaggcgagtgaacgatcgaccgaatcggccggcgacgctgagaagcgctcgcag
aaatctcttcatacgcttcgcgcgcgtagcgataacagtacgattcggaagacttcgcgc
ccttatgcaagctcgacgaattccgttaagctgctatcgccggacaaagattcgcagttg
aaatttctggcaatagactctccgacgagcaagagcgaagactccaaagccagttcgata
cggcagcaagtcgctatcaaagaaagtaacttcgcagcgtccactagagtcgcagcggca
caaaagtcttactgcgaaagctccagtaaaaagaggaaaagaacgagatacgctggtgac
gaagggctattcgacgacagcgacgattccgacgtcttgttcgacgttcctacaaagctt
aaatgtagcagatcattccatggcgaaaaatcggatttggatgcgaataaaaagcgccgt
ttgaatttttcggacgatcaaatttccaaagtgatctcgaattctgaggaacagcacgcg
cccaagaaaatagtgccgattctcgactcggacacagaatccaagttatcagcaaatgtc
gcagaaaatcggaagagccacaaattcgcaacatcggaaatcaaagagtcggaagtattt
gaaagcaacagcatcttccattcggacaatttggactttatgctgcaagaactaatggaa
tcgaacggtagtaaaacgcagaagatcgcgaatccttctaacgatgacattataaatcga
gtgctgcagatcgatcaaccgcgcagtgatcctgacgcgcgccggtcgctgagttccgcc
gcgctgaacgacagaacgagtcagagcaaaaagaacagcggagattacttgctgcaggac
aatttcgacgagaccatcgccaacatcgacctgccgcaaagcgaggatatgatgtcgagc
agcgagcagccggctcgcaatcatagccgcacgctggtggaacagaatacgccgaactgt
cccacgatgacggatgaaccgcgcgacgccacgcaggaaactccgatgatatcatcgacg
aacgacattttcgagcattcttccagaaacactaaaaagttgtccgcgagaaacgcttcg
gaaaatttcgacaaggaaaacgcgatatcccacgtccacaaaaaacgcgagtcaatggac
gatcgagggaacaaaaaaggcacaacgacaaaacactttgttgacacaattgataaggat
tttcatcgagagattacgaagcacaacgcatcacacgagaaggagaagtcattcagtcgc
gccgagagtctccagacagataaaaaacataatgtttcgacaaattcattgagtcagctg
gacgaaaacgacacgctcatgaacgtcacgcaggatcaggctcatctgcaaatctttgag
caggacctattcagcagcccgtctacacgaaaaaccacgccgaaagtggcttccgagaac
gatcgagaggtgcagcgcactccgaaaagaagaaagctaaatgacagagacgagaatgca
gcggcagaaggacgccacgccgaagaagacgacattgtcgagaacactcctgagagaacg
aggaagagtagcgaaagcaacataaaaacagttgaatcgaggaaaagtacatcacatcta
tcagcgattacgattacgagcggtagctctgtatacaacatgatgccgctgtgtgaaagc
acgccaaaagtagcgcgtcccgccgcaatcgggcagagcaaacaggaaactattctgagc
ggtagtattttgctgccgaagcagacggacggtaagacgtcggagaacgtccgtcagctg
tctgacagacaacagctatgctttgtatgcaccagcttgtcgaaagttcaagtatcgctc
gtgacggaactcgcggcgaagcacggcgcgaattacgtgaaccagttcgatcgcaacgta
acgcacgtcatcgtgaacacgaccggcgagcggaacgtagccagaagcacgctcaagtat
ctccaaggcatagctcaccggaagtggatagtcagctataggtgggtcgaggattgtctc
gagcgagagaaactgctggacgaaggtccctacgaagcgactacgttcaacgacggcgtc
atcggcgttaagggcccacggaattccagactgcgcgagaaggatctgtttgaagggttc
acgtttttgtgcgtcaaaccgtataacaacgtctcgcacagccaatatcaagacttgtta
ctcgccactggagccacggtggtcgattctctcgaagatctcgctaagaaaggaggcatg
aaaggcgtggtaatccaggacaatactcatgatattaaaacgatcgaacgttggtatcac
accgccaaagcggcgcccattatcgtcgaatggatagtggaatgtatcgggcaatacaaa
ttgctgaagctcgcatcacagtatttgtcggtggaggactttcaggccatcggctatccg
cgagagctcgtggaagaatacgaagaatacagtgacgatgagaattaa
DBGET
integrated database retrieval system
