Lactobacillus iners: GYK47_04025
Help
Entry
GYK47_04025 CDS
T08045
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lid
Lactobacillus iners
Pathway
lid00300
Lysine biosynthesis
lid00550
Peptidoglycan biosynthesis
lid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GYK47_04025
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYK47_04025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lid01011
]
GYK47_04025
Enzymes [BR:
lid01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GYK47_04025
Peptidoglycan biosynthesis and degradation proteins [BR:
lid01011
]
Precursor biosynthesis
Amino acid ligase
GYK47_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_C
Mur_ligase_M
RNA_binding
Motif
Other DBs
NCBI-ProteinID:
QIC18632
LinkDB
All DBs
Position
complement(852292..853851)
Genome browser
AA seq
519 aa
AA seq
DB search
MSESSISLNTCILILKEHHLLKSCATQDVVSTKMDYISYDSRDIKTNTLFFCKGKGFRPT
YLSYAKENGAICYVAEQPYPEGKGMHALIVSNVTKAMSLLSAAFYRFPQDDLFLIAFTGT
KGKTTSAYFLKGILDKLNGGRTALFSSVDDVVGPKPEDRFKSSLTTPESLDLFRDMRRAV
DNGMTHLVMEVSSQAYKKNRVFGLTYDLGFFLNITPDHIGVNEHPNFEDYLHCKLQLMVN
SRKCIINAMTDHFDEIYAAATTTTNPDSIYLFARNDYDNPDLKRPIDFRFSSVETDMCET
KFKLYSETDAARNIPVEGNYSLKMIGDFNEINATAAIIGAGLAGVNYQDCYDGIKNVTIP
GRMETLTTANHGTVIVDYAHNKASMIALMSFMQKEFDSPKIIVVVGAPGDKGISRRAGFS
ESLSLYANQVFLTTDDPGFEDAQVIADEIAAGIDHDRCQVMIELDRQKAIAEAIKGAKDD
DVVLICGKGADPYQKIRGVDTPYPTDIKVAQEVINKLEN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcaagcatttcattaaatacgtgtatattgatattgaaagaacatcattta
ttaaaatcatgtgcaacgcaagatgttgtttcaacaaagatggattatatatcatatgat
tcacgtgatattaaaacaaatacgttatttttctgtaagggaaaaggatttcgtcctacc
tatttatcttatgctaaagaaaatggtgcaatttgttatgtagcagagcaaccatatcct
gaaggaaaagggatgcacgctttgattgtaagcaatgtaacaaaggctatgtcattgtta
tcagctgctttttatcgtttcccacaagatgatttattcttaatagcttttactggaacc
aaaggaaaaacaacatctgcttatttcttaaaaggaatcttagataagttaaatggtggt
agaacagctttgttttcatctgttgatgatgtagtagggcctaaacctgaagatcgtttt
aaatcgagtcttacaacgccagaatctctagatttatttagagatatgcgacgtgctgta
gataatggtatgacacatttagttatggaagtatcatctcaggcttataagaaaaatcga
gtttttggattaacttatgatttgggctttttcttaaatattacgccagatcatatcgga
gttaatgagcatcctaattttgaagattatttacattgtaaattgcaattaatggttaat
tccagaaaatgtattattaatgcaatgactgatcatttcgatgaaatctatgctgctgca
acaactacgactaatccagatagcatctatttgtttgcacgtaatgattatgataatcca
gatttaaaacgtccaattgattttagattttcttctgtggaaaccgatatgtgtgagact
aaattcaaactatatagtgaaaccgatgctgcacgtaatatacctgttgaaggaaattat
agtttgaagatgataggcgatttcaacgaaattaatgctactgctgcaattattggagca
ggtttagctggagttaattatcaagattgctatgatggtattaagaatgttactattcct
ggaagaatggaaaccttaacaactgccaatcatggaacagttatcgtcgattatgcacat
aataaggcttcaatgattgctttgatgagttttatgcaaaaagagttcgatagtcctaag
ataattgttgtagttggagctcctggtgataaaggtatttctcgtagagcaggctttagt
gagagtttgagtttgtatgctaaccaagtatttttaactactgatgatccaggttttgaa
gatgcccaagttattgctgatgaaattgcagccggtattgatcatgatcgctgtcaagta
atgattgaattagatcggcaaaaggccattgctgaagctatcaaaggggctaaagatgat
gatgttgtattgatatgtggtaagggtgctgatccatatcaaaaaataagaggtgtagat
actccttacccaacagatattaaggtagctcaagaagtaattaataaattagaaaattaa
DBGET
integrated database retrieval system
