Leishmania infantum: LINJ_25_0770
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Entry
LINJ_25_0770 CDS
T01112
Name
(RefSeq) putative DNA repair protein
KO
K15083
DNA repair protein RAD16
Organism
lif
Leishmania infantum
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_25_0770
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
LINJ_25_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
zf-RING_11
ResIII
zf-C3HC4_2
ERCC3_RAD25_C
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8_fungal
PHD
Motif
Other DBs
NCBI-GeneID:
5069541
NCBI-ProteinID:
XP_001466107
UniProt:
A4I1B6
LinkDB
All DBs
Position
25:259817..263095
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AA seq
1092 aa
AA seq
DB search
MSNFAKHPDLTLNERLVWRPAKGKEHVYNYIVQKSPTARARCRKCSQLIPKGEMRVGVPI
RHNAGDNGWISAWQHLGCTRMERSESEDYKNTMHGFAALKPEEQAHVVNEVNSTEVPEHL
KPLDPEDLVHRGKMEQMTPPSTLLRHLLPYQKEGMGWMVRQEVESPVKGGILADEMGMGK
TIQTIGMMLAHRINGPTLVVCPVSSMLQWEAEIKEHVVPGSLSVVVVYRTTKVTKEELES
ADVVLTTYPMLEQAWRALINEIKVPCPYCELLFIPRQLVVHNKYFCGPRAKKTQKQAKRE
KHTTPAAASSSRGVQSDETIRKGLRTLHVDMGDEEGAEAEVNAPNTTTAHPQRKRGRKGA
ANVEDDPAGKVNGCGTPAAKKEKQEESESKVASGCRSPAEKANRKCPVKAEDHNDEGAAL
AQKGKVLQPAAASRGVVGPIGMYQELMREAGRTVLSRWDAARKDDESSSDEEVEDESSEE
SNSDASNLSYNSAAAAAEEAAAAEQASKALEAFRCAACHFQLLRYPFCPRNGQHHVVREE
LRDIIEKDTGGDDVDLDASIFHSIKWARVILDEAHRIKGRTTSTARSAFALAAEYRWCLT
GTPLQNRVGDLYSLLRFLRMRPYAHYYCETEGCSCASLSHPFSSTSLHQCVFCGHGPLQH
HSYFNRYILNPINRYGYIGDGRRGMMMLSNDVFSRAMLRRTKVERAADLQLPSLTIEVHC
IKLTKEERNFYESLYKKSTAEFDTFVHKGTVLHNYAHIFQLLSRLRQALDNPLLVMQGMD
VGPVVNVKGVCGICGDGIEGESALKVHPCRHQFHRLCLGQFLESAPDKELHCPTCFVRIN
VDLRQLRQDAEDDDDEGVGGFAAALPPELEDEVNSEITEDDEQAQALQHVESKVKRRTAH
AKPTKKEQRGIFARLDPQKPLHGTKLDAIANYIEKVPKDEKVVVFSQFGSMLDLTQYWLQ
RRSIRAVKLCGSLTLTQRQSVLQAFLHDQNVRVILISLKAGGEGLNLQVANHVVLTDPWW
NPAVEMQAVQRAHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDGKLQSLNK
LTEEDLQFLFTR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacttcgccaaacatcccgatcttacgctaaacgagcggctggtttggcggcca
gcgaagggcaaggagcatgtctacaactacattgtgcaaaagtctccgacggccagggca
cgatgtcggaagtgctcgcagctgatcccgaagggggagatgcgagtaggtgtgcccatt
cgccacaacgcaggcgataatgggtggatctctgcgtggcagcaccttggctgcacccgc
atggagagaagtgagtcagaggactacaaaaacaccatgcatgggtttgcggcattgaag
ccagaggaacaagcgcatgtggtaaatgaggtcaattctacggaggtgccagagcatctc
aagccgctggacccggaggacttggtgcaccgaggtaagatggagcaaatgacaccaccg
tcgacgctgctgcggcacctgttgccttatcagaaggagggaatggggtggatggtgcgc
caggaggtcgagtctcccgtcaagggcggcattcttgcagacgagatgggcatgggcaaa
actatccagaccattggaatgatgctcgcgcaccgcataaacggtcccacgctcgttgtc
tgtccggttagctccatgttgcaatgggaggctgaaatcaaggagcatgtggtccctggg
tcgctatcggtagtcgtcgtataccgcaccacaaaggtgaccaaggaggagctggagagc
gcggatgttgtcctcaccacttacccaatgctggagcaggcctggcgcgctctcatcaac
gagataaaagtaccgtgtccctattgtgagctgctcttcattcctcgtcagttggtggtg
cacaacaagtacttctgtggtccgcgcgccaagaagacacagaagcaggcgaagcgcgaa
aagcacaccacgcctgcggcggcgagtagctcaaggggtgtgcagtctgacgaaaccatt
cgaaaggggttgcgaacactccacgtagacatgggtgacgaagagggggccgaggcggag
gtcaatgcgcccaatactacgacggcacatccacagcggaagcgaggtcgcaagggcgcg
gccaacgtcgaggatgacccggctgggaaggtcaacggttgtggcaccccggcagccaag
aaggagaagcaggaagagtcggagagtaaggtggccagtggctgccgatcgccagccgag
aaggcaaatcgaaagtgccccgtcaaggcggaggatcacaatgatgagggggccgctctg
gctcaaaaaggcaaggtgctccagccagctgcggcttcgcggggggttgttggaccgatc
ggcatgtaccaggaacttatgcgggaagccggccgaaccgtgctcagtcgctgggacgcg
gcgaggaaggatgacgagagcagcagcgatgaggaggtcgaggatgagtccagcgaggaa
agtaacagcgacgcatcgaatttgtcgtacaactctgcggctgctgctgccgaggaagcg
gctgcggcggagcaagcttccaaagccctggaggcgttccgctgcgccgcttgccacttt
cagctgctgcggtaccctttctgccccaggaatggccagcaccacgttgtcagagaggag
cttcgagacatcatcgaaaaggacactggcggcgacgatgtcgacctcgatgcttccatc
ttccactccatcaagtgggcgcgcgttatcctggacgaggcgcaccgcatcaaaggtcga
acaacgagcacggcccgctctgccttcgccttggcggccgagtaccgatggtgcctcacc
ggcaccccactacagaatcgtgttggtgatctatacagtcttctgcgctttttgcgcatg
cggccatacgcacactactactgcgaaacggaaggctgctcgtgcgcctcgctctcgcac
cccttctcgtccacctcgcttcatcagtgcgtcttctgcggtcatggaccgctgcagcac
cactcctatttcaaccgctacattctcaatccgatcaaccgctatggctacatcggagac
gggcgacgcggtatgatgatgctgtctaacgacgtattttcccgggcaatgctgcgccgc
accaaggtcgagcgggccgccgacctgcagctgccgtcgttgacaatcgaggtgcactgc
atcaagctcacgaaggaggagcgtaacttttacgagtccctgtacaagaagagcacggcg
gagttcgatacgttcgtgcacaagggcacagtgctgcacaactacgcacacattttccag
ctgcttagtcgtctgcgccaggccctcgacaacccactgcttgtgatgcagggcatggat
gttggccctgtggtgaacgtcaagggagtgtgcggcatctgtggcgacggcatcgagggc
gagagcgctctgaaggtgcacccgtgccggcaccagtttcaccgactttgtctcggccaa
ttcctggagagcgcaccggacaaggagctccactgccccacctgctttgtacgaatcaac
gtggatctgcggcagttgcgacaggatgcggaggacgacgatgacgagggcgtcggcggc
tttgcggcagcgttgcctcccgagctggaagatgaggtcaactctgagatcactgaggac
gacgagcaggcgcaagcgttgcagcatgtggagagtaaggttaagcggcgcacagcgcac
gccaagccgaccaaaaaggagcagcgcggcattttcgcccggctggacccgcagaagccg
ctgcacggcacgaagctcgatgccatcgctaactacatagagaaagttccgaaagacgaa
aaggtggttgtcttctcgcagtttggcagcatgctagacctgacgcagtattggctgcag
cgccgctctataagggctgtaaagctgtgtgggtcactgacgttgacgcagcggcagtcg
gtgttgcaggccttcctgcatgaccaaaacgtgcgcgtcatcctcatctccctgaaggca
ggcggagagggtttgaacctgcaggtggccaatcacgtggtgctgaccgatccgtggtgg
aacccagcggtcgagatgcaggccgtgcagcgagcgcaccgaatcgggcagacccgcccg
gttcacgccgtccgctttgtcacggagcactcagtggaggagcgcatggtcgacctgcag
gacaagaagatgctcgttttcgagggcaccattgacggcaagttgcagtcgctcaacaag
ctcaccgaggaggatctgcagttcctctttacaaggtag
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