KEGG   Leishmania infantum: LINJ_30_1390
Entry
LINJ_30_1390      CDS       T01112                                 
Name
(RefSeq) ATP-binding cassette protein subfamily H, member 3
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
lif  Leishmania infantum
Pathway
lif03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LINJ_30_1390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lif03019]
    LINJ_30_1390
Messenger RNA biogenesis [BR:lif03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     LINJ_30_1390
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_16 AAA_28 RsgA_GTPase AAA_29 AAA_24 VapE-like_dom ATP-synt_ab AAA_23 Dynamin_N
Other DBs
NCBI-GeneID: 5071026
NCBI-ProteinID: XP_001466983
UniProt: A4I5G4
LinkDB
Position
30:458130..459455
AA seq 441 aa
MIGAPWPPEAVFGNTVDRVASPAPVPERKASIADALHLRLSRFLEKMSWGERRRVQILYG
MLYPATVYLLDECSTDIDVAERRTVLELVRQECEAKDGCCVYATHILDGIEGWATHLLLM
EGGRAVDFKAVEKLTMPLEDYALQFMSKRAHAARGFDAVAAPSLSQGSSAAISTTLSACP
TTSSAAYPTPSTADAPVTYWPRGHADEKRSEIVINCAQLNYKDVFKNLSFQVFRGERVLL
CGGNGTGKSTLLNMLGGKQFFDNRHGSLSVLGKRCYDDMLLNALVSYGGDWWTAVPGGEV
HVREMLQLRTSRAERLREMLAVDIDWDVRHISTGEQKRVQLLLHLLDDKPVVLLDEATTD
LDVYQRHSLLQFLYEESVQRGVTVVYSTHIFGGLEGWANAAVLLDRTMRGVHAVWRASEG
QPISLQRVVDAIVALKAREAF
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgattggtgcaccatggccacccgaggcggtgttcggcaacactgtggaccgcgtggcc
tcgccggcgccggtaccagagcgaaaggcgagtatcgccgacgcgctgcacctacgcctc
tcccgcttcttggagaagatgagctggggcgaaaggagacgggttcagatcctttatggc
atgctctaccccgccaccgtgtacctcctcgacgagtgcagcaccgacatcgacgttgca
gagcggcgcactgtgctggaactggtacggcaggagtgcgaggcgaaggacgggtgctgc
gtgtatgcgacccacattctcgacggaattgaaggctgggccacccacctgctgctcatg
gaggggggccgtgcggtggacttcaaggcggtggaaaagctcaccatgcccttggaggac
tacgcgctccagttcatgagcaagcgcgcccacgctgctcgcggcttcgacgccgtggcg
gcgccgtcgctgtcgcaggggagttctgcggccatttcaacgacgttgtcagcttgccca
acgacatcttcagccgcctacccaaccccttcgacagccgacgcgccggtcacgtattgg
ccacgagggcacgcggacgagaagcgaagcgaaatcgtcatcaactgtgcgcagctgaac
tataaggatgtgtttaagaacttgtcgtttcaggtgttccgcggcgagcgggtgctgctg
tgcggcggtaacggcactggcaagtccaccttgctgaacatgcttggcggaaagcagttc
tttgacaaccgccacggctctctctccgtgcttggtaagcggtgctacgatgacatgctg
ctgaacgctcttgtcagctacggcggcgattggtggactgccgtgcccggtggggaggtg
cacgtgcgcgaaatgctccagcttcggacctctcgtgccgagcgcttgcgtgagatgctg
gccgtggacatagactgggatgtgcgacacatcagcactggagagcagaagcgtgtgcaa
ctgctcttgcacttgctggatgacaagcccgtcgtgctgcttgatgaggcgaccaccgac
ctggacgtttatcagcgccacagcctcctgcagttcctctacgaagagagcgtgcagcgc
ggggtgacagtcgtctactcgacgcacattttcgggggtctagagggctgggccaacgct
gcggtactactggaccggaccatgcgcggcgttcatgcggtgtggcgcgcctctgaaggg
cagcccatctcactgcagcgcgtcgtcgatgcaatcgttgctcttaaggcgcgagaagcc
ttttga

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