Leishmania infantum: LINJ_30_1390
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Entry
LINJ_30_1390 CDS
T01112
Name
(RefSeq) ATP-binding cassette protein subfamily H, member 3
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_30_1390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_30_1390
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LINJ_30_1390
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_28
RsgA_GTPase
AAA_29
AAA_24
VapE-like_dom
ATP-synt_ab
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
5071026
NCBI-ProteinID:
XP_001466983
UniProt:
A4I5G4
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Position
30:458130..459455
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AA seq
441 aa
AA seq
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MIGAPWPPEAVFGNTVDRVASPAPVPERKASIADALHLRLSRFLEKMSWGERRRVQILYG
MLYPATVYLLDECSTDIDVAERRTVLELVRQECEAKDGCCVYATHILDGIEGWATHLLLM
EGGRAVDFKAVEKLTMPLEDYALQFMSKRAHAARGFDAVAAPSLSQGSSAAISTTLSACP
TTSSAAYPTPSTADAPVTYWPRGHADEKRSEIVINCAQLNYKDVFKNLSFQVFRGERVLL
CGGNGTGKSTLLNMLGGKQFFDNRHGSLSVLGKRCYDDMLLNALVSYGGDWWTAVPGGEV
HVREMLQLRTSRAERLREMLAVDIDWDVRHISTGEQKRVQLLLHLLDDKPVVLLDEATTD
LDVYQRHSLLQFLYEESVQRGVTVVYSTHIFGGLEGWANAAVLLDRTMRGVHAVWRASEG
QPISLQRVVDAIVALKAREAF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgcaccatggccacccgaggcggtgttcggcaacactgtggaccgcgtggcc
tcgccggcgccggtaccagagcgaaaggcgagtatcgccgacgcgctgcacctacgcctc
tcccgcttcttggagaagatgagctggggcgaaaggagacgggttcagatcctttatggc
atgctctaccccgccaccgtgtacctcctcgacgagtgcagcaccgacatcgacgttgca
gagcggcgcactgtgctggaactggtacggcaggagtgcgaggcgaaggacgggtgctgc
gtgtatgcgacccacattctcgacggaattgaaggctgggccacccacctgctgctcatg
gaggggggccgtgcggtggacttcaaggcggtggaaaagctcaccatgcccttggaggac
tacgcgctccagttcatgagcaagcgcgcccacgctgctcgcggcttcgacgccgtggcg
gcgccgtcgctgtcgcaggggagttctgcggccatttcaacgacgttgtcagcttgccca
acgacatcttcagccgcctacccaaccccttcgacagccgacgcgccggtcacgtattgg
ccacgagggcacgcggacgagaagcgaagcgaaatcgtcatcaactgtgcgcagctgaac
tataaggatgtgtttaagaacttgtcgtttcaggtgttccgcggcgagcgggtgctgctg
tgcggcggtaacggcactggcaagtccaccttgctgaacatgcttggcggaaagcagttc
tttgacaaccgccacggctctctctccgtgcttggtaagcggtgctacgatgacatgctg
ctgaacgctcttgtcagctacggcggcgattggtggactgccgtgcccggtggggaggtg
cacgtgcgcgaaatgctccagcttcggacctctcgtgccgagcgcttgcgtgagatgctg
gccgtggacatagactgggatgtgcgacacatcagcactggagagcagaagcgtgtgcaa
ctgctcttgcacttgctggatgacaagcccgtcgtgctgcttgatgaggcgaccaccgac
ctggacgtttatcagcgccacagcctcctgcagttcctctacgaagagagcgtgcagcgc
ggggtgacagtcgtctactcgacgcacattttcgggggtctagagggctgggccaacgct
gcggtactactggaccggaccatgcgcggcgttcatgcggtgtggcgcgcctctgaaggg
cagcccatctcactgcagcgcgtcgtcgatgcaatcgttgctcttaaggcgcgagaagcc
ttttga
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