Limnohabitans sp. 63ED37-2: L63ED372_01324
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Entry
L63ED372_01324 CDS
T04121
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L63ED372_01324 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_01324 (nth)
Enzymes [BR:
lih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L63ED372_01324 (nth)
DNA repair and recombination proteins [BR:
lih03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L63ED372_01324 (nth)
Prokaryotic type
L63ED372_01324 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ALK88534
LinkDB
All DBs
Position
complement(1371464..1372096)
Genome browser
AA seq
210 aa
AA seq
DB search
MKPAQIESFFATLQAANPMPVTELEYTSVFELLAAVLLSAQATDVGVNKATRRLFPVAGT
PQKILDLGLAGLESYIKTIGLYRSKAKHLMETCRILVEQHGGQVPRTREALEALPGVGRK
TANVVLNSAFGEPTMAVDTHIFRMGNRTGLAPGKTPLEVELKLLKRIPAQYLVDAHHWLI
LHGRYVCQARKPLCAQCSVVAFCDFKPKTV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgctcagatcgaatccttctttgccaccctgcaagctgccaaccccatgcct
gtgaccgagctggagtacaccagcgtctttgagctgcttgccgcggtgctgctgtcggcg
caggccaccgatgtgggcgtgaacaaggccacgcgccgtctgttcccggtcgcgggcacg
ccgcaaaaaatcctggacctgggtctggctgggctggagagctacatcaaaaccatcggc
ctgtaccgcagcaaagccaaacacctgatggaaacctgccggattctggtcgagcaacac
ggcggccaagtgccccgcacacgcgaagccctcgaagccctgcccggcgtgggccgcaaa
acggcgaatgtggtgttgaattcggcctttggcgagccaacgatggcggtggacacccac
atcttccgcatgggcaaccgcacaggtttggccccgggcaaaacgcctttggaagtcgaa
ctcaaactgctcaaacgcatccctgcccagtacttggtggacgcgcaccactggttgatc
ctgcatgggcgctatgtgtgccaagcccgcaaacccctgtgtgctcagtgctcggtcgtg
gctttttgtgacttcaaacccaaaacagtctga
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