Limnohabitans sp. 63ED37-2: L63ED372_02328
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Entry
L63ED372_02328 CDS
T04121
Symbol
dksA
Name
(GenBank) RNA polymerase-binding transcription factor DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_02328 (dksA)
03021 Transcription machinery [BR:
lih03021
]
L63ED372_02328 (dksA)
03009 Ribosome biogenesis [BR:
lih03009
]
L63ED372_02328 (dksA)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Other transcription factors
Others
L63ED372_02328 (dksA)
Transcription machinery [BR:
lih03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
L63ED372_02328 (dksA)
Ribosome biogenesis [BR:
lih03009
]
Prokaryotic type
rRNA transcription factors
L63ED372_02328 (dksA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
ALK89531
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All DBs
Position
complement(2485733..2486941)
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AA seq
402 aa
AA seq
DB search
MKTPIKTKPPGPSAVASKTTTTAAKAKVVTAQAAAKPAAKPASKAVAKPAPKVAAKPATK
ATAKPAAKAAAKPAAKPSAKAPVKPVAKVAAKAVAKPVAKPAAKPAAKPAAKPVAKPAAK
AKPTPKPAVPAKAVKDKSAAASAAASKAAAPSSPPRSSAAPKAATAAPPAQIPKTKNMSL
TKVESVQVPVESNPVSPAPAAEQLVRATRPSARLAQITVPSLPPAVASTAAKSSFLPSAA
PAPVAVPFAPIKKDPKLANNWKSKKVEELSDAEIIAMSDDEYMNDKQMAYFRLKLTLLKQ
DILASAGQTTEHLREDTVVVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIQRIDAG
DYGFCDETGEAIGVGRLLARPTATLSLEAQQRRELKQKMFGD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaccccgatcaagacaaagccccctggtccatctgcagtggcctccaaaaccacc
accaccgcggccaaggccaaggtggtgactgcccaagcggcggccaaacctgctgccaaa
cctgcatccaaagcggtggccaagcctgctcccaaagtggctgcgaaaccagcgacgaaa
gcgacggctaaacctgctgccaaagcggctgcgaaaccagcggccaaacccagcgccaaa
gccccggtgaaacccgttgccaaagtggctgccaaagctgtggctaaacccgttgcaaaa
cctgcggctaaacctgcggctaaacctgcggctaaacctgttgccaaacccgctgccaaa
gccaagcccacgccaaaaccggctgtgcctgccaaggccgtgaaagacaaatctgctgcg
gcctccgccgctgcatccaaagcggctgcgccatccagtccaccccgatcgtctgctgca
cccaaagctgcaacggctgccccgccagcccagatacccaaaacgaaaaacatgagtctt
accaaagtggaatcagtccaagtccccgtcgaatccaaccccgtcagcccagcacctgcg
gctgaacagttggttcgcgccacacggccttcggcccgtttggcccagatcaccgtgcct
tccttgccgccagccgtggcctccacagcggccaagtccagtttcttgcccagcgccgca
cccgcacctgttgcggtgccttttgcgcccatcaagaaggaccccaagctggccaacaac
tggaaatccaaaaaggttgaagagctgtcggacgccgagatcatcgccatgtccgacgat
gagtacatgaacgacaagcagatggcgtatttccgcctgaagctgaccctgctcaagcag
gacatcttggccagtgcgggacaaaccaccgagcacctgcgcgaagacacggtggtggtg
cctgaccctgccgaccgcgccacgattgaagaagagcatgccttggagctgcgcacgcgc
gaccgcgagcgcaagttgctcaagaagatcgaacaatcgatccagcgcatcgatgcgggc
gattacggcttttgcgatgaaaccggcgaggccatcggtgtgggccgcttgttggcccgc
ccaacggccactttgtcgctggaagcccagcagcggcgcgaactcaaacaaaagatgttt
ggcgattga
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