Limnohabitans sp. 103DPR2: L103DPR2_02762
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Entry
L103DPR2_02762 CDS
T04120
Symbol
dksA
Name
(GenBank) RNA polymerase-binding transcription factor DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lim03000
]
L103DPR2_02762 (dksA)
03021 Transcription machinery [BR:
lim03021
]
L103DPR2_02762 (dksA)
03009 Ribosome biogenesis [BR:
lim03009
]
L103DPR2_02762 (dksA)
Transcription factors [BR:
lim03000
]
Prokaryotic type
Other transcription factors
Others
L103DPR2_02762 (dksA)
Transcription machinery [BR:
lim03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
L103DPR2_02762 (dksA)
Ribosome biogenesis [BR:
lim03009
]
Prokaryotic type
rRNA transcription factors
L103DPR2_02762 (dksA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
ALK93140
UniProt:
A0A0P0MJP6
LinkDB
All DBs
Position
complement(2847138..2848490)
Genome browser
AA seq
450 aa
AA seq
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MKKPLKTSSKTAVKKTSTAASAKAKSAAPANKLSKPAPAKAVKTAVTKAVAKGKPVVKKA
APKASAKPAAKPATKPVTKTNKASAKPVVQTKAKTASKTPVKVPVKANVKASAKVVAKPA
AKPVVKAKPAAKPVVKSAAKTVAKPTPKVAPKAAAKVAAKPTAKPSAAAKAPVKAPAKVA
PKGASKAPEKASAKPVAKTETKPVTKPVTKPVAKPVAPAKAEKPAKPAKAEKVVTPPAAP
VAAPVATGDVPARAVRPSARLAQITVPSMAQSVASTAAKASYLQNMPSQVLTPPPFVAVK
KDPKLANNWKKKTPDQLTDAEVMAMSDNDYMNDAQMAFFRLKLVALKQGILANAGETTEH
LREDTVVVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIQRIDAGDYGYCDETGEPI
GVGRLLARPTANLSLEAQQRRELKQKMFGD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagccccttaaaacgagctcaaaaaccgcagtgaaaaaaaccagtacagcagcg
agtgccaaagccaaatcggctgcaccggccaataaactgagcaaacccgcgcctgcgaaa
gcagtcaagactgctgtcaccaaagccgtggccaagggcaaacctgttgtgaagaaggct
gcgcctaaagcgtcggccaagcctgcagccaaacctgcaaccaaacccgtgaccaaaacc
aacaaagcttctgccaagcctgtggttcaaaccaaggccaaaacagcgtctaagacgcct
gtcaaagtccctgttaaagccaatgtcaaagccagcgctaaagtggttgccaagcccgct
gccaagcctgttgtaaaggccaaacctgctgcaaaacccgtggtgaaaagtgcggccaaa
acagttgccaagcccacaccgaaagttgcgccaaaagcagccgccaaagtggctgccaag
ccaacggccaagccatctgcagccgccaaagcgccagtcaaagcaccggccaaagtcgca
cccaaaggtgcaagcaaagcgcctgaaaaagcctcagccaaaccggtcgccaagacagaa
accaaacccgtcactaaacctgtcacgaaacccgtcgccaagcctgttgcccctgccaaa
gcagaaaagccagccaagcctgcaaaagctgaaaaagttgtcactccgcctgcagcaccc
gttgctgcacctgtggcaacgggtgatgtacccgcacgtgcggttcgtccttcagcgcga
cttgcccaaattacagtgccatcgatggcccaatcggtggcttctacggctgcaaaagcc
agttatctccaaaacatgccttcacaagttctcacacctcccccctttgttgccgttaaa
aaagaccctaagttggccaataactggaaaaagaagacgcctgatcaactcaccgacgca
gaggtcatggccatgtccgacaacgactacatgaacgatgcgcaaatggcatttttccgc
ctcaaattggtggctttaaagcaaggcatcttggcgaacgctggcgaaaccactgagcat
ttgcgtgaagacaccgtggtggtgcccgatcccgctgaccgcgccaccattgaagaagaa
catgcgctggagttgcgtacgcgcgatcgtgaacgcaagcttttgaagaaaatcgagcaa
tccattcaacgcattgatgcgggcgattacggttattgcgatgaaacaggcgaacccatt
ggtgtgggccgtttgttggcgcgccccacagccaatttgtccttggaagctcagcaacgc
cgcgaactcaaacagaaaatgtttggcgattga
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