Limnohabitans sp. INBF002: LINBF2_07160
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Entry
LINBF2_07160 CDS
T09962
Name
(GenBank) hemolysin D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi01501
beta-Lactam resistance
limi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LINBF2_07160
01503 Cationic antimicrobial peptide (CAMP) resistance
LINBF2_07160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
limi03036
]
LINBF2_07160
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_07160
01504 Antimicrobial resistance genes [BR:
limi01504
]
LINBF2_07160
Chromosome and associated proteins [BR:
limi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LINBF2_07160
Transporters [BR:
limi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LINBF2_07160
Antimicrobial resistance genes [BR:
limi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LINBF2_07160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
OEP
DUF4330
PA4575
FeoB_associated
Motif
Other DBs
NCBI-ProteinID:
BDU52481
LinkDB
All DBs
Position
complement(711997..713181)
Genome browser
AA seq
394 aa
AA seq
DB search
MKNIKPRWIVIGIIVLALVAGVWRAMSNKSAQQAAASAPVAVQTQVELASSDVMKAELRD
ITQGLAVSGTVKAVNYAVIKARVAGELKEVVAREGDAVKAGDVLARIDPTEYQRRWQQAA
ETASAAKSQMEIAQRQWDINKSLVDRGFISKIAMDNSDASYQGAVASHKAAIAGADVARK
ALDDATLRAPFAGIVSGRAAQVGERVAIDAKIMELVDLSQLEVEVPLSPSESMDVRVGQL
ASLQVEDRKETVGAKVKRISPSAQTGSRSVLIYLALDKAEGLRHGLFAKGILGMGKSQVL
AVPLSAVRTDRAQPYVQVVEPLGDQLQVVHKTVTLGIRGMDLTQPESETMVGVTGLAEGS
TLLKGQVGALREGMVVKYTAKAANAAASAASAAN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatcaaaccccgttggatcgtgatcggcatcatcgttttggccctggtggct
ggcgtgtggcgtgccatgagcaacaagagcgcacaacaggccgcagcttctgcgcctgtg
gccgtgcaaacacaagttgaattggccagtagcgatgtgatgaaagccgagctgcgcgac
atcacccagggcttggcagtgtctggcacggtcaaggccgtgaactatgccgtcatcaaa
gcccgcgtggcgggtgaactgaaagaagttgtggcgcgtgaaggcgatgctgtcaaagcg
ggcgacgtgttggcacgcattgaccccaccgaataccaacgccgttggcaacaagccgca
gaaacagccagcgccgccaaatcacaaatggagatcgcgcagcgtcagtgggacatcaac
aaatccttggttgaccgcggcttcatctccaaaattgccatggacaactctgacgcgtcc
taccaaggtgccgtggccagccacaaagccgccatcgccggtgccgacgtggcccgcaaa
gccttggacgacgccaccttgcgcgcgccttttgcaggcatcgtctcaggccgtgccgcc
caagtgggcgaacgtgtggccattgacgccaagatcatggagttggtggatttgagccaa
ctcgaagtggaagtgcctttgagccccagcgaatcgatggacgtgcgcgtgggtcagttg
gcttcgctgcaagtggaagaccgcaaagaaaccgtaggcgccaaggtcaaacgcatcagc
cccagcgcccaaaccggcagccgcagcgtgttgatttatttggcactcgacaaagccgaa
ggtttgcgccacggtttgtttgccaaaggcattttgggcatgggcaagagccaagtgttg
gctgtgcctttgtctgccgtacgcaccgaccgcgcacaaccttatgtgcaagtggtggag
ccattgggcgaccaactgcaagtggttcacaaaaccgtcacccttggcatacgcggcatg
gacttgacgcagcccgaatctgaaaccatggtgggcgtgacaggcctggctgaaggcagc
actctgctcaaaggccaagtgggcgccttgcgtgagggcatggtggtgaagtacaccgcc
aaagctgccaatgctgcggcttctgcagccagcgctgccaattaa
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