Limnohabitans sp. INBF002: LINBF2_11760
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Entry
LINBF2_11760 CDS
T09962
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00020
Citrate cycle (TCA cycle)
limi00785
Lipoic acid metabolism
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01120
Microbial metabolism in diverse environments
limi01200
Carbon metabolism
limi01210
2-Oxocarboxylic acid metabolism
Module
limi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
limi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LINBF2_11760 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LINBF2_11760 (sucA)
Enzymes [BR:
limi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LINBF2_11760 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BDU52941
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All DBs
Position
1171125..1173989
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AA seq
954 aa
AA seq
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MSETTVYQAYSGNTHLFGGNTPYVEEMYENYLANPGSVPDSWREYFDALQHVPAVDGSNA
KDVPHLPVINAFAERAKAGGTKVVMASENVEMGRKRTAVQQLIAAYRNVGQRWADLDPLK
RTERPNIPDLDPAFYGFSDADQETVFDTSNTFFGKNNMSLRELLNALRETYCGTLGAEFM
YTSEMGEKRWWQEKLESIRSKPNFNSDKKKAILERLTAAEGLERYLHTKYVGQKRFSLEG
GESFIAAMDELIQQAGLKGVQEVVIGMAHRGRLNVLVNTMRKLPADLFAEFDHTAPEDLP
AGDVKYHQGFSSDVSTAGGPVHLSLAFNPSHLEIVNPVVEGSVRARMDRRADPTGSQVLP
VLVHGDSAFGGQGVNQETLALAQTRGYTTGGTVHIIVNNQIGFTTSDPRDMRSSVFCTDI
VKMVEAPVLHVNGDDPEAVVLATQLALEYRSTFRKDVVLDIVCFRKLGHNEQDTPALTQP
LMYKKIAAHPGTRKLFADKLATQGLGDTLGDDMVKAYRAALDAGKHTDDPVLTNFKTKFT
VDWSPFMGKKWTDAGETAIPMTEWKRLAEKITTIPASVTPHQLVKKVYDDRAAMGRGDIP
VDWGMGEHMAFASLVASGYPVRLSGEDCGRGTFTHRHAVIHDQKREKWDTGTYVALQNVT
ENQAPFVVIDSILSEEAVLGFEYGYASNDPNTLVVWEAQFGDFANGAQVVIDQFIASGEV
KWGRVNGLTLMLPHGYEGQGPEHSSARLERFMQLAADTNMQIVQPTTASQIFHVLRRQMV
RDLRKPLIIFTPKSLLRNKDATSPVSEFTKGSFQTVIPENKALKADKVKRVLVCSGKVYY
DLVKKREELGADDVAILRAEQLYPFPHKAFAAELKKYPNATELVWTQDEPQNQGAWFFVQ
HYIHENMLPGQKLGYSGRAASASPAVGYSHLHQEQQKSLVEGAFGKLKGFVLTK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagacaaccgtctatcaagcctattcgggcaatacccatctcttcgggggcaac
accccttacgtcgaagagatgtacgaaaactatctagccaatcctggtagcgtgcccgat
tcgtggcgcgagtacttcgacgcgcttcagcatgtgcccgcagtcgatggctcgaacgcc
aaagacgtgcctcacttgcccgtcatcaacgcctttgcagaacgcgccaaagctggcggt
accaaagtcgtcatggccagcgaaaacgtcgaaatgggtcgcaagcgcaccgctgtgcag
caactcatcgccgcttaccgcaatgtgggccaacgctgggcagacctcgatccactcaag
cgcactgagcgtcccaatattcctgacctcgatcccgctttctacggcttctctgatgcc
gaccaagaaaccgtgttcgacaccagcaacaccttcttcggcaagaacaacatgtccttg
cgcgaattgctcaacgctttgcgtgaaacctactgcggcaccttgggcgccgagttcatg
tacacctcagaaatgggtgaaaagcgttggtggcaagaaaagttggaaagcatccgcagc
aaacccaacttcaattccgacaaaaagaaagccatcctcgagcgcttgaccgctgcggaa
ggcttggagcgttacctccacaccaaatacgtgggtcaaaagcgcttctcgctcgaaggc
ggcgaaagcttcatcgccgcgatggacgagctgatccaacaagcgggcctcaaaggcgtg
caagaagtggtgatcggtatggcccaccgtggccgtctgaacgtgttggtcaacaccatg
cgcaagttgcctgccgacttgtttgccgagttcgaccacaccgcccctgaagacttgcct
gctggtgacgtgaaataccaccaaggcttcagctctgacgtgtcgactgctggtggcccc
gtccacttgtctttggcgttcaacccctcccacttggaaatcgtcaaccccgtggtcgaa
ggctctgtgcgcgcccgcatggaccgccgcgctgacccaacgggcagccaagtgttgccc
gtgttggtccacggtgactccgctttcggcggtcaaggtgtgaaccaagaaaccctggcc
ttggcccaaacccgtggttacaccacaggcggcacggtgcacatcatcgtgaacaaccaa
attggtttcaccacctctgacccacgcgacatgcgctccagcgtgttctgtaccgacatc
gtcaagatggtcgaagcgcctgtgttgcacgtcaacggtgacgatccagaagccgtcgtg
ttggctacccagttggcgctcgagtaccgttcgaccttccgcaaagacgtggtgcttgac
atcgtgtgtttccgtaaactcggccacaacgagcaagacacaccagcgctgactcagccg
ctgatgtacaaaaaaatcgccgctcaccctggcacccgcaagctgttcgccgacaagttg
gccacacaaggcttgggcgacacattgggcgacgacatggtcaaggcctaccgcgccgct
ttggatgcgggcaagcacaccgatgatcctgtgttgaccaacttcaagaccaagttcact
gtggactggtcacccttcatgggcaagaagtggacagacgctggcgaaaccgccatcccc
atgaccgagtggaagcgcttggctgaaaaaatcaccaccatccccgcatccgtcacgcct
caccagttggtgaaaaaggtgtacgacgaccgcgccgcgatgggccgtggcgacatcccc
gtggattggggcatgggcgagcacatggctttcgcatcgttggtggccagcggctacccc
gtgcgtttgtcgggcgaagattgcggccgtggcacgttcacacaccgccacgctgtgatt
cacgatcaaaagcgtgaaaagtgggacacaggcacttatgtggcgttgcaaaacgtgact
gagaaccaagctccgtttgtcgtgatcgactcgatcttgtctgaagaagcagtgctcggt
ttcgaatacggctacgcctcgaacgaccccaacaccttggtggtctgggaagcccagttc
ggcgacttcgccaacggcgcccaagtggtgatcgaccagttcattgcctccggcgaagtg
aagtggggccgtgtgaacggcttgaccttgatgttgcctcacggctacgaaggccaaggt
ccagagcacagctcggcacgcctcgagcgcttcatgcaactcgccgctgacaccaacatg
cagatcgtgcagcccaccacggccagccagatcttccacgtgttgcgtcgtcaaatggtg
cgcgacttgcgcaagcctttgatcatcttcacacccaagtccttgctgcgtaacaaagac
gcgacatcgcctgtgtctgagttcaccaaaggttcgttccaaaccgtgattcctgagaac
aaagcgctcaaggccgacaaggtcaagcgcgtgttggtgtgctcgggtaaggtttactac
gacttggtcaagaagcgtgaagagttgggtgctgacgacgtggctatcttgcgcgccgaa
caactctacccattcccacacaaagccttcgctgctgaactcaagaagtaccccaacgcc
actgagttggtgtggacgcaagacgagccacaaaaccaaggcgcatggttcttcgtgcag
cactacatccacgaaaacatgttgccaggccaaaagctcggctactcgggccgtgccgct
tctgcgtcaccagccgtaggttactcacacttgcaccaagagcagcaaaagtcgctggtc
gaaggcgcattcggcaagctcaaaggcttcgtgctgaccaaataa
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