Limnohabitans sp. INBF002: LINBF2_19400
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Entry
LINBF2_19400 CDS
T09962
Name
(GenBank) multidrug transporter AcrB
KO
K18138
multidrug efflux pump
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi01501
beta-Lactam resistance
limi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LINBF2_19400
01503 Cationic antimicrobial peptide (CAMP) resistance
LINBF2_19400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_19400
01504 Antimicrobial resistance genes [BR:
limi01504
]
LINBF2_19400
Transporters [BR:
limi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LINBF2_19400
Antimicrobial resistance genes [BR:
limi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LINBF2_19400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Bot1p
Motif
Other DBs
NCBI-ProteinID:
BDU53705
LinkDB
All DBs
Position
1960609..1963833
Genome browser
AA seq
1074 aa
AA seq
DB search
MTDSNLRISGRLARLFQSAQITPLLALVCFLLGVFAVMVTPREEEPQINVTMANVLIPFP
GASVKDVEQMVSGPAEQVLSQIAGVEHVMSVSQPGMSVVTVQYKVGVPRTEALVRLYDTV
NSHADWLPKGLGVLQPLIKPKGIDDVPILSLTLHGKDTDLSAFELERIAQNMEQDLKRVK
GTREVTTIGGPSRAIQIDIDPARMQAAGITVPELRMALQAAHLGAPVGDLLVGQQAIAIE
SGPFLGNAKDVASLVVGVRAGTPLHVHDIAQVRDGGAQANTAVWHGVAGAKPTERTAVTI
AITKKPGENAIEVANAVVTQVGTLKQSKIPANVEVTTTRNYGETANEKAKKLIQKLLFAT
ASVVALVFIALGRREAAIVGTAVILTLTVTLFASWAWGFTLNRVSLFALIFSIGILVDDA
IVVVENIHRHQGLFPQKNLTQIIPGAVDEVGAPTILATFTVIAALLPMAFVTGLMGPYMS
PIPINASMGMLLSLAVAFVVTPWLARIWMKATPAHGVEQTSAFKPWLKRFFNGVFTPFLN
DQSGQRNRWSLGAAVLGVIAVSVALPVSGLVALKMLPFDNKSEFQIVVDMPAGTRVEETE
KVLRALGAHLATVPEVIHYQAYAGLSAPINFNGLVRQYYLRSGGNVGDIQVNLQDKHLRK
AQSHIIAMRERPALQAIGQQFNANVKVIEVPPGPPVLAPIVAEVYGPTDEGRNQVAKSVR
AMFSAQQGVVDVDDSTISAATRQVLLINRQKASQMGVSQQAIVSTLRAALAGESTVYAHD
QNKYAGAIVIRLPKSEQDSLDKLLSLGVRNSQREIVPIRQLVTISDTQREQPIYHKDLLP
VTYVVGDMAGKVDSPLYGMFGMRSGLSQIQAPNGKPVNEYFIQQPTDPYQHYAVKWDGEW
QMTYETFRDMGAAYAVGLVLIYLLVVAQFGSYLVPLIIMAPIPLTIIGVMPGHALLGAPY
TATSMIGMIALAGIIVRNSILLVDFIRLQVSQGVALKDAVVASAITRAQPIVLTGLAAMM
GAFFILDDPIFNGLAISLIFGIFVSTALTLLVIPLLYFMAFKNKPSSVISGEHA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcaaaccttcgcatctctggtcgtttggcccgtttattccaaagcgcacaa
atcacaccgctgctggctttggtgtgctttctgctcggtgtctttgccgtcatggtgacg
ccacgtgaagaagaaccacagatcaacgtgaccatggccaacgtgctcattccctttccc
ggcgcgtcggtcaaggatgtggaacaaatggtgtcggggcctgcggaacaagtgctgtcg
caaattgcaggcgtcgagcacgtcatgtcggtctctcaacctggcatgtctgtggtgacc
gtgcaatacaaagtgggcgtgccacgcaccgaagccttggtgcgtttgtatgacaccgtc
aactcacatgccgattggctgcccaaaggcttgggcgtgttgcagcccctcatcaaaccc
aagggtattgacgatgtaccgatcttgtcgctcaccttgcatggcaaggacactgatttg
agcgcgtttgagttggaacgcatcgcacaaaacatggagcaagatttgaaacgggtcaaa
ggcacacgcgaagtcaccacgataggtggcccatctcgcgccattcaaattgacatcgac
cctgcacgcatgcaagccgcaggcatcactgtgcccgagctgcggatggctttgcaagct
gcacacctgggcgcgcctgtgggtgatttactggtgggccaacaagccatcgccattgag
tctggccctttcttgggtaacgccaaagatgtggccagcttggtggtgggcgtgcgtgcg
ggcacgcccctgcacgtgcatgacattgcgcaagtgcgagatggcggcgctcaagcaaac
actgccgtgtggcatggcgtggcaggtgccaagcccaccgaacgcaccgcagtgaccatc
gccatcaccaaaaaacctggtgaaaacgccattgaagtggccaacgccgtggtcactcaa
gtgggcacactcaagcaaagcaaaatccccgcaaacgtagaagtcaccactacgcgcaac
tatggcgaaaccgccaacgagaaagccaagaagctgattcaaaagctcttgtttgccacc
gcctctgtcgtagccttggtgttcatcgccttagggcgtcgtgaagctgccattgtgggc
accgctgtgatcttgaccttgacagttactttgtttgcctcatgggcttggggcttcacg
ctcaaccgcgtgtcgctgtttgctttgattttctcgattggtattttggtagacgacgcc
atcgtggtggtggaaaacatccaccgtcaccaaggtttgtttccgcaaaaaaacctcaca
caaatcatcccaggtgcagtcgatgaagtgggtgcgcccaccatccttgccaccttcaca
gtcattgcagctttgttgcccatggcgtttgtgacaggtttgatgggcccgtacatgagc
cccatcccgatcaacgcgagtatgggcatgttgttgtctttggccgtggcctttgtggtc
acaccctggttggcacgcatttggatgaaagccacgcctgcacacggcgttgaacaaacc
agcgccttcaagccatggctcaagcgctttttcaatggtgtgttcacaccctttttgaat
gaccagtcgggtcaacgcaaccgctggagcctcggcgccgccgtgttgggtgtcatcgct
gtgtcagtggccttgccagtatctggcttggttgccttgaagatgctgccctttgacaac
aagtctgaattccaaatcgtggtcgacatgcctgctggcacccgtgtggaggaaaccgaa
aaagtattgcgtgccttgggcgctcacttagctaccgtgccagaggtcatccactaccag
gcttatgcaggcctgagtgcccccatcaacttcaacggtttggtgcgtcaatactatttg
cgcagtggtggcaacgtgggtgacatccaagtcaacctgcaagacaaacacttgcgcaaa
gcgcaaagccacatcatcgccatgcgagagcgtcctgccctgcaagccattggccaacag
ttcaatgcgaatgtgaaagtgattgaagtgccacccggcccacccgtgttggcccccatc
gtggcagaggtgtatggtccgacagacgaaggtcgcaatcaggtagccaaatctgtgcgt
gcgatgtttagcgcacaacaaggcgtggtggatgtggacgacagcaccatcagtgcagcg
actcgccaagtgttgctgatcaaccgccaaaaggcctcacaaatgggtgtgtcacagcaa
gccatcgtgagcaccttgcgtgcagcattggcgggggaatcgaccgtctacgcgcacgac
caaaacaaatatgcgggcgccattgtcattcgattgcccaagagtgaacaagactcgctg
gacaaactgctgagccttggcgtgcgcaactcacaacgcgaaatcgtgcccattcgtcag
ctcgtcaccatcagtgacacacaacgcgaacaaccgatttatcacaaagacttgctgccc
gtcacctatgtggtgggcgacatggcgggcaaagtggatagcccgctgtacggcatgttt
ggcatgcgcagtggcttgagtcaaattcaagcgcccaatggtaagccggtgaatgagtac
ttcatccaacaacccaccgatccttaccagcactacgccgttaagtgggatggtgagtgg
cagatgacctacgaaaccttccgcgacatgggcgcggcttatgccgtgggcttggtgttg
atctatctgttggtggtggcgcaatttggttcttacctcgtgccgctcatcatcatggcc
cctattccgctgaccatcattggggtgatgcccggccacgcattgttaggtgcaccctac
accgccacctccatgattggcatgattgccttggctggcatcatcgtgcgcaactcgatc
ttgctggtggacttcatccgcttgcaggtctcgcaaggtgtggcgctgaaagacgccgtg
gtggcctcggccatcacccgcgcacagcccattgtgttgacaggtttggctgccatgatg
ggcgcgttctttatcttggatgaccccatcttcaatggcttagccatctcgctcatcttc
ggtatttttgtctcgaccgcgctcaccctgctggtgattccactgctctatttcatggct
ttcaagaacaagccaagctctgtcatttctggagaacacgcatga
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