Limnohabitans sp. INBF002: LINBF2_20810
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Entry
LINBF2_20810 CDS
T09962
Symbol
ileS1
Name
(GenBank) isoleucine--tRNA ligase 1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LINBF2_20810 (ileS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limi01007
]
LINBF2_20810 (ileS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_20810 (ileS1)
Enzymes [BR:
limi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
LINBF2_20810 (ileS1)
Amino acid related enzymes [BR:
limi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LINBF2_20810 (ileS1)
Transfer RNA biogenesis [BR:
limi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LINBF2_20810 (ileS1)
Prokaryotic type
Other AARSs
LINBF2_20810 (ileS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
BDU53846
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All DBs
Position
2089841..2092726
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AA seq
961 aa
AA seq
DB search
MTDKATPSSTDYRATLNMMDTPFPMRGDLPKREPAWAKQWNEHGLYKKLRAARQGAPLFV
LHDGPPYANGKLHIGHALNKVLKDMIVKSKQLGGFDAQYIPGWDCHGLPIENAIEKLHGR
KLSRDDMQAKSRAFATEQIDQQREDFKRLGVLGDWERPYRTMDPANEAGQLRAFKRVMER
GFVYRGLKPVYWCFDCGSSLAEFEIEYADKKSDTLDVAFLCAQPEKLAAAFGLPKLDKPA
FAVIWTTTAWTIPANQALNMHPEIDYALVDTERGLFLCAASLVEKCLARWKLEGQVVATA
KGDKLGLIEFNHPLSHVDAGYQRTASVFLADYVGESDGTGIVHSAPAYGVDDFNSCMANG
MKYTDILNPVQGNGAYAADFPLFGGQHIWKAVPVILEALQNAGRLMATQTITHSYPHCWR
HKTPVIYRAAAQWFIRMDAFDSTTEKTTGKFITDKSSKSLRELALHAIDQTHFYPENGRA
RLRDMIANRPDWCISRQRSWGVPVPFFLHKDSGELHPRTMAIMDQAADIVEKGGIEAWSR
VTVEDILNQPGDDAASYTKSTDILEVWFDSGSTFQHVLRGSHKDAYDRAPHHDQGPEADL
YLEGHDQHRGWFHSSLLLGCALYDRAPYKGLLTHGFATDGQGRKMSKSLGNTVAPQEVSD
KMGAEIVRLWVASTDYSGDLNIDDKILARVVDAYRRIRNTLRFLLANVSDFDPAKDAVAF
DDLLEIDKYALSRAAQVQADILSHFDKYEFHPVVSKLQLYCSEDLGAFYLDVLKDRLYTT
APKSLARRSAQTALHQITHAMLRWMAPFLSFTAEEAWTTFGKSESIFLETFTNLGASNAA
LMDKWHAVQQVREIANKEIENKRTEGLVGASLQAELVIHCDGAAYDALASLGDDLKFVFI
TSKVTLAKGEGLTVDVKASAATKCERCWHYSDDVGHNAAHPTLCGRCDSNLHGDGEVRHF
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaagccaccccatcgtccaccgattaccgtgccaccctcaacatgatggac
accccgttccccatgcgtggtgacttgcccaaacgcgaacccgcttgggccaagcaatgg
aacgagcacggcttgtacaaaaaactgcgcgcggctcgccaaggcgcaccgctctttgtg
ctgcacgacggcccgccctacgccaacggcaagctgcacatcggccacgcgctgaacaaa
gtgctgaaagacatgatcgtcaagtccaagcaattgggcggatttgacgcgcaatacatc
cccggctgggactgccacggtttgcccatcgaaaacgccatcgaaaaactgcatggccgc
aaactcagccgcgacgacatgcaggccaagagccgcgccttcgccaccgagcaaattgac
caacaacgcgaagacttcaaacgcttgggcgtgctgggcgactgggagcgcccctaccgc
accatggaccccgccaacgaagccggccaactgcgcgccttcaaacgcgtgatggaacgt
ggctttgtctaccgcggcttgaagcccgtgtactggtgctttgactgcggctcgtcattg
gccgagtttgaaattgaatacgccgacaaaaagagcgacacgctcgacgtggccttcttg
tgtgcccagcccgagaaactggctgctgcatttggtttgcccaagctcgacaagccagcg
ttcgccgtcatctggaccaccaccgcgtggaccatccctgccaaccaagcgctcaacatg
caccccgagattgactacgccttggtggataccgagcgtggcttgttcttgtgcgcggct
tcgttggtcgagaaatgtttggcgcgttggaagctcgaaggccaagtcgttgcgaccgcc
aaaggcgacaagctcggcctcattgaattcaaccacccactgtcacacgtagacgctggc
taccaacgcacagcctccgtgttcttggccgactacgtgggcgagagcgacgggacaggc
atcgtgcacagcgcacccgcctacggcgtggatgacttcaactcatgcatggccaacggc
atgaagtacaccgacatcttgaaccccgtgcaaggcaacggcgcatacgccgctgacttc
ccgttgttcggtggccaacacatctggaaagctgtgcccgtcattctggaagcgctgcaa
aacgcaggccgcttgatggccacacaaaccatcacgcacagctacccacattgctggcgt
cacaaaacgcctgtcatctaccgcgcggcagcgcagtggttcatccgcatggatgcgttt
gacagcaccaccgaaaaaaccacgggcaagttcatcaccgacaagtcgagcaagtcattg
cgcgaactcgcattgcacgcgattgaccaaacccacttctacccagaaaacggccgtgca
cgtttgcgcgacatgattgccaaccgccccgactggtgcatctcgcgccaacgcagctgg
ggtgtgcccgtgccgttcttcttgcacaaagacagcggcgagttgcacccacgcaccatg
gccatcatggaccaagcggccgacatcgttgaaaaaggcggcatcgaagcgtggagccgc
gtgacggtggaagacatcctcaaccagcccggcgacgacgcagccagctacaccaagagc
accgacatcttggaagtgtggtttgactcaggttccaccttccaacacgtgctgcgcggc
agccacaaagatgcctacgaccgtgcgccgcaccacgaccaaggcccagaagccgacttg
tatttagaaggtcacgaccaacaccgcggctggttccacagctcgctgttgctcggctgc
gccttgtacgaccgcgcgccctacaaaggtctgctgacccacggctttgccaccgacggc
caaggccgcaagatgagcaagagcttgggcaacaccgtcgcaccgcaagaagtgagcgac
aagatgggcgccgaaatcgtgcgcttgtgggtggccagcactgactactcaggcgacctc
aacatcgacgacaaaatcttggcccgcgtggtcgatgcctatcgtcgcatccgcaacacg
ctgcgcttcttgctcgccaacgtgagcgacttcgacccagccaaagacgccgtggcgttt
gacgacctgttggaaatcgacaagtacgcgctgtctcgcgctgcgcaagtgcaggccgac
atcttgagccacttcgacaagtacgagttccaccccgtggtgtcgaagttgcagctgtat
tgctcggaagatttgggcgcgttttatttggacgtgctcaaagaccgcctgtacaccaca
gcgcctaagtcactcgcacgccgcagcgcgcaaaccgcgttgcaccaaatcacccacgcc
atgctgcgttggatggccccgttcctcagcttcaccgctgaagaagcgtggaccacgttt
ggcaagtctgagtcgatcttcttggaaactttcaccaacctcggcgcaagcaacgcagcc
ttgatggacaagtggcatgccgtgcagcaagtgcgcgaaatcgccaacaaagaaatcgag
aacaaacgcaccgaaggtttggtgggcgcatcattgcaagcagagttggtcatccactgc
gatggcgcagcctatgacgccttggcttcattgggcgacgacttgaagtttgtgttcatc
acctccaaggtcactttggcaaaaggcgaaggcttgaccgtcgacgtcaaagccagcgca
gccacaaagtgcgaacgctgctggcactacagcgacgatgtgggccacaacgccgctcac
cccaccctgtgcggccgttgcgacagcaacttgcacggcgacggtgaagtgcgtcatttc
gcctaa
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