Limnobacter profundi: HKT17_02910
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Entry
HKT17_02910 CDS
T06583
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
limn
Limnobacter profundi
Pathway
limn01501
beta-Lactam resistance
limn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HKT17_02910
01503 Cationic antimicrobial peptide (CAMP) resistance
HKT17_02910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_02910
01504 Antimicrobial resistance genes [BR:
limn01504
]
HKT17_02910
Transporters [BR:
limn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HKT17_02910
Antimicrobial resistance genes [BR:
limn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HKT17_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Dabb
Syndecan
DUF6594
Motif
Other DBs
NCBI-ProteinID:
QJR28734
UniProt:
A0ABX6N4R3
LinkDB
All DBs
Position
complement(617433..620489)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKLSDFSIKNYQFTLVIFFLLTAIGISAYQNIPRTEDPYFDISAFRINVIYPGADPREME
QQVAKPIEDALRSLDDLKEMLSTSRNSGGVVFVRFDAEVDVDKKFDEVNRELNSIRDQLP
AGIQKLEIERINPGFTNIIQYSLVSETASYADLANYAEDLSEAFERISSVRESESWAYPE
QQVRVSLNFKKLAELGIQAADVARVIQGESLNIPGGPVEEGARRLNVQTSGQYRSVEEIR
NTVIAGTGTGGDLGGRLVRVGDVADVQWDYENQEVMARFNGQRAVFVTANQKDERNIFVT
QKALQETADEFEKTLPPNIKMERGFEQYKNVEKRIDRLTFDFALAVTLVLITLLPLGLRA
SGIVMVSVPLSLLTGLACLYYAGFSLNQLSIAGLVVALGLLVDDSIVVIENISRYLRMGY
NRVDAARLATKQISLAVVGCTATLLFAFLPLLMLPDNAGKFIRSLPVAVVFTVIASLFVA
LTIIPFLASRVLKKDENEHGNIVLQKLMGLIDKIYTPLLHRALQTPKTVVAASLVLFVAS
LGLAPLMGMSLFPKANTPQFVIEVGLPPGSSLTATDNVVKQVENKLSEFDEITAVMATVG
EGNPQIYYNVFQQDKQSNVGELFVQLKEYNDDTPKLLDNIRNELKTIAGANLIVREFENG
PPIDAPIGIRLVGPEIETLRELSAQVERIMLANPGTQNVDNPQRTGRSDLRLKVNFEKAG
LLGVNSAELDQAVRLAIAGAFAGEIRQSNGDAYDISVRGPAGVRSNLSALDDFHVISRTG
QAVPLTQLTTLELDDNLNSIYRFDRERAVLLTAYTRTGYNTEKISNEIAKQIDEMGLPTG
YRYKMAGEVKSRQESFAGFGTAILITVFGILAILVLEFGSFKSTLIVLFVIPLGVTGGMV
MLFLTGNSLSFTAMIGFIALIGIEIKNSILLVDFTNQLREEGKGLDESIEEAGRIRFLPI
LLTSATAVGGLMPLALQGGGLYSPMAWVIIGGLISSTFIGRLVTPVLYKLLPPDLQRT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctcggacttttccatcaagaattaccagttcacgctggtgatatttttcctg
ctgacagcaattggcatcagcgcgtatcaaaacattcccagaaccgaagacccgtatttc
gacatcagcgcatttcgcatcaatgtgatttatccaggtgctgacccacgcgaaatggaa
caacaggtagccaagcccattgaagatgccctgcgcagcctggacgacttgaaagaaatg
ctttcaacatcccgcaacagtggcggtgtggtgtttgtgcgttttgatgcggaagtcgat
gttgataaaaagttcgatgaagtgaaccgtgaactcaacagcattcgggaccagctaccc
gcaggcatacaaaagctggagattgaacgaatcaaccccggcttcaccaacatcattcaa
tactcattggtgtcggaaacagcaagctatgccgacctggccaattacgctgaagacctt
tccgaggcgttcgagcgtatttcatcggtgcgtgaaagcgaaagctgggcttaccccgag
cagcaggtacgcgttagcctgaactttaaaaagctggctgaactgggaatacaggcagcc
gatgtagcgcgtgtcattcagggtgagtcactgaacattccaggtgggccggtagaggaa
ggcgcacggcgtttgaacgtgcaaacctcgggccagtaccgcagcgttgaagaaatcaga
aacaccgtgattgccggcaccggcacgggcggtgatttgggtggtcgcctggttcgtgtg
ggcgatgtcgccgatgtgcagtgggactatgaaaatcaggaagtcatggcccgcttcaat
ggtcagcgtgcggtgtttgtcactgccaaccagaaagacgaacgcaatatttttgtgact
caaaaagccttgcaggaaacagcggacgaattcgagaaaaccttgcctccgaatatcaaa
atggagcgcggtttcgagcagtacaaaaacgtggaaaagcgcattgatcgcctcaccttc
gacttcgcactggcggtaacactggtgctgatcaccctgttgccgctgggcttgcgggcc
tcgggcattgtgatggtcagtgtgcctttgtcgctgctcaccggtttggcctgtttgtac
tatgcaggcttctcattgaaccagctttcaattgctggcctggtggttgcattgggcctg
ttggtcgacgactcaatcgtggtgattgaaaacatttcacgttacctgcgcatgggctat
aaccgtgtggatgcggcacgcctggccaccaagcaaatttcacttgctgtggtgggttgt
actgcaaccctgttgtttgccttcctgcctttgttgatgctgccagacaacgccggaaaa
ttcattcgctccttgccggtggccgtggtgtttacagtgattgcatcgctgtttgttgca
ttgaccatcatcccgtttctggccagccgtgtgctgaagaaagacgaaaatgagcatggc
aatatcgtgctgcaaaagctgatgggcttgatcgacaaaatttacaccccactgctgcac
cgcgccttgcaaacccccaaaaccgtggtggctgcatcactggtgttgttcgtggccagc
ctgggcctggcacccctcatgggcatgtcgctgttccccaaggccaatacaccgcagttt
gtaattgaggtgggcctgcccccgggatccagcctgactgccaccgacaatgtggtgaaa
caggttgaaaacaagctctcggagtttgatgaaattacggcggtcatggccaccgtgggc
gagggcaacccgcaaatttattacaacgtatttcagcaagacaaacaatcgaacgtgggt
gaattgtttgtacaactcaaggaatacaacgacgacacgcccaagctgctcgacaacatt
cgcaatgaactgaaaacaattgcgggcgccaatctgattgtgcgtgagtttgaaaatggt
ccacccattgatgcacccattggcatccgtttggtagggcccgaaatagaaacgctgcgt
gaattgtctgcacaggtagaacgtatcatgctggcaaatcccggtacacaaaacgtggac
aacccacagcgcaccgggcgcagcgaccttcgcctgaaagtgaattttgaaaaagcgggt
ttgctgggtgtgaactcagcggagctggaccaggctgtgcggcttgccattgcaggtgcg
tttgcaggtgaaattcgccagagtaacggcgatgcctacgacatcagtgtgcgtggccct
gccggtgttcgcagcaatctaagcgcgctggacgacttccatgtgatttcacgcacaggc
caggcagtaccgctaacccaactcaccacgcttgaactggatgacaacctgaacagcatt
taccgcttcgaccgcgaacgcgccgtgctgctgaccgcttacacacgcactggctacaac
accgagaagatcagcaatgaaattgccaaacaaattgacgaaatgggcttgcccactggt
taccggtacaaaatggcgggcgaagttaaaagcaggcaagaaagctttgccggttttggt
actgcgatcctgattaccgtatttggcattctggccattctggttctggaattcggcagt
ttcaaaagcacgctgattgttttgttcgtaattccgctgggtgtaacgggtggcatggtc
atgctgttcctgacagggaattcgctcagtttcacagcgatgattggcttcattgcgctg
atcggcattgaaatcaagaactcgattttgctggtggacttcaccaaccagttgcgtgaa
gaaggcaaagggcttgatgagtccatcgaagaagcaggccgtatccgattcctgccgatt
ctgctgaccagtgccaccgccgtgggcggcttgatgccactggcgctgcaaggtggcggg
ctttactcgcccatggcctgggtgattattggtgggcttatttcttccaccttcattggt
cgcctggtgacgccggtgctttacaagctcttgccacccgacttgcagagaacatag
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