Limnobacter profundi: HKT17_08115
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Entry
HKT17_08115 CDS
T06583
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
limn
Limnobacter profundi
Pathway
limn01501
beta-Lactam resistance
limn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HKT17_08115
01503 Cationic antimicrobial peptide (CAMP) resistance
HKT17_08115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
limn03036
]
HKT17_08115
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_08115
01504 Antimicrobial resistance genes [BR:
limn01504
]
HKT17_08115
Chromosome and associated proteins [BR:
limn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HKT17_08115
Transporters [BR:
limn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HKT17_08115
Antimicrobial resistance genes [BR:
limn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HKT17_08115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
Beta-barrel_RND
BSH_CzcB
BSH_LcnD
HH_EMRA
HH_MFP_RND
RND-MFP_C
BSH_CusB
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QJR29681
UniProt:
A0ABX6N5L3
LinkDB
All DBs
Position
complement(1739315..1740394)
Genome browser
AA seq
359 aa
AA seq
DB search
MIKRLVYFLVLVLLLGAAYSVSQTLLGNSSANAPNQGSKGAAPKVLVEVVKLESTASSFG
AIATGWADKSAEIFAIVDEKVTQVLFKPQQKVKKGELLVQQDDREEQLALRLAEVQLKNT
KSLLDRYKQAVGKGAVPQTQVDSAQADYEAAQVAVDQAKLAISNHQIRAPFAGVVGITDI
DPGQRIGPGVLVTGVDSREVIYVDFEVPEALVGQLSASKMDQIEVLASTPSVPGQEFKAR
VVALDSRLNAEKRSLRVRANISNPDDLLRPGMSFAVQMAVKGQMLASVPEIALQWDREGS
YVWMIREGKADRENVRVADRRQGRVFLDGNIKEGESVVVEGGLRLAEGVVVEQVEDPLQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaaacgtctggtttattttcttgttctcgttctcttgttgggggctgcctactca
gtttctcaaacactgctgggaaattcatctgccaatgcgcccaatcagggcagcaaaggc
gcagcgcccaaggtcttggtcgaggttgtaaagcttgagtccaccgcaagttcttttggt
gccattgcaaccggctgggccgacaaatccgcagaaatctttgccatcgtggatgagaaa
gtcactcaggttttgttcaagccacagcaaaaggtaaaaaagggcgaattactcgttcaa
caagacgatcgagaagaacagttggcgcttcggcttgcggaagtacagctgaagaacacc
aaaagcttgctggacagatacaaacaagcagtgggcaagggggcggtgccacaaacccaa
gttgattcagcccaagccgattacgaggctgcacaagtggctgttgatcaagcgaaactt
gctatttcaaaccaccaaattcgtgctccttttgccggtgttgtcggaattaccgatatt
gaccctggtcaacgtataggccccggcgtattggtcaccggtgtggattcccgtgaagtt
atttatgtggattttgaggtgcctgaggccttggttggtcaattgagtgccagcaaaatg
gatcaaattgaagtgcttgccagcacgccttctgtacctggccaggaattcaaggcgcgt
gtggttgccttggacagtcgtttgaatgctgaaaagcgatcgctgcgcgttcgggcaaat
atcagcaatcccgatgacttattgcgccctggcatgtcgttcgcagtgcaaatggcagta
aaggggcaaatgctcgcctcggtgccagaaattgctttgcaatgggacagggaaggctct
tatgtctggatgattcgagagggaaaagccgaccgtgaaaacgtgcgcgtggccgaccgg
cgtcagggccgtgtgtttctcgatggcaacatcaaagagggtgaatctgtggtggttgaa
ggtggtttgcggcttgcagaaggcgtagttgtcgaacaggttgaggatcccttgcaatga
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integrated database retrieval system
