Limnobacter profundi: HKT17_09540
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Entry
HKT17_09540 CDS
T06583
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
limn
Limnobacter profundi
Pathway
limn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HKT17_09540 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_09540 (nth)
Enzymes [BR:
limn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HKT17_09540 (nth)
DNA repair and recombination proteins [BR:
limn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HKT17_09540 (nth)
Prokaryotic type
HKT17_09540 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF7366
Motif
Other DBs
NCBI-ProteinID:
QJR29930
LinkDB
All DBs
Position
2056313..2056945
Genome browser
AA seq
210 aa
AA seq
DB search
MNKEKRTEIFKRFQQANPEPKTELEYSTPFELLAAVLLSAQATDKGVNIATRKLFAIANT
PASIAALGVAGVEGYIKTIGLFRSKAKHLVQTAEILRDQHNGEVPADREALESLPGVGRK
TANVVLNTAFGQPTMAVDTHIFRISNRTGIAPGKDVLEVEKRLLKLVPQEFMLNAHHWLI
LHGRYVCKARKPECTRCSIVDLCEFKKKTT
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaaagcgtaccgagattttcaaacggtttcagcaggccaatcccgaacca
aaaaccgagctggagtattcaacgccgtttgaactgctggctgcagtgttgctgagcgca
caggccaccgacaaaggcgtgaatatcgccacgcggaaactgttcgctatcgcaaataca
ccagcatccatcgcggcgcttggtgtagccggggtcgagggttacatcaaaaccattggt
cttttccgatccaaagccaagcaccttgtgcaaactgccgaaattttgcgggaccagcac
aatggcgaggttccggctgaccgggaagcacttgaaagccttccgggcgttggtcgcaaa
acagcaaacgtggtattgaacaccgcatttggacagcccaccatggctgtcgatacgcat
attttccggattagtaaccgcacaggtatagcccctggaaaagacgtactggaagttgaa
aaacgattgttgaagctggtgccccaagagtttatgttaaacgcccaccattggctgatt
ttgcatggtcgctatgtgtgcaaagcacgcaaacccgaatgcactcgttgtagtatcgtg
gacttgtgcgaattcaaaaagaaaacaacatga
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