Limnobacter profundi: HKT17_12975
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Entry
HKT17_12975 CDS
T06583
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
limn
Limnobacter profundi
Pathway
limn00300
Lysine biosynthesis
limn00550
Peptidoglycan biosynthesis
limn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HKT17_12975
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HKT17_12975
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
limn01011
]
HKT17_12975
Enzymes [BR:
limn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HKT17_12975
Peptidoglycan biosynthesis and degradation proteins [BR:
limn01011
]
Precursor biosynthesis
Amino acid ligase
HKT17_12975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
LpxK
YqeC
CbiA
Motif
Other DBs
NCBI-ProteinID:
QJR30547
UniProt:
A0ABX6NAW4
LinkDB
All DBs
Position
complement(2775782..2777278)
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AA seq
498 aa
AA seq
DB search
MISAYLHSVSEVLAELHERGFYADCSGLVTDHRRLTGPRDVFLAVPGEKFDPRNLADDLL
IEQRCGLVLVDYDDQRAYQSASVLPVLHLKTMLADLAFGYYETPSDAMTIIAVTGTNGKT
TVTRWLAQALNHLGKKAAVIGTLGYGEPDQLKAHTGLTTPDVVGVHHLLHELRQHQFDTV
CIEASSIGLEQRRLACVSIDVALFTNLSQDHLDYHGDMAAYGRSKMILASWPTLRLAVVN
ADDSFGMEFLANVQRRNIDCSAVGRADSAECQILSVAHQENGQRIELKINGASTQIDTSI
IGEFNADNMALVFATLIRLGYDASQVKSALAGVTPAPGRMQHIEGEPAVVVDYAHTPDAL
EKTLLALRPFANKRQGKLWVVFGCGGDRDRSKRPLMGAAAADKADFVVVTSDNPRSEKPE
NILQEIVDGIDKARQDKLHVEVDRVRAIEFAVAKASAKDVVLLAGKGHESTQTIGAQVIA
HSDVQCAMTALGKRGAHA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcttacttgcattctgtgtccgaggtgttggctgagcttcatgagcgcggc
ttctacgccgattgctcgggcttggtgacagatcaccgtcgcttgacaggtcctcgggat
gtgtttcttgccgtgcctggtgaaaagtttgatccgcgaaatttggccgatgatctgttg
atcgagcagcggtgtggtttagtactggtcgattacgacgaccagcgcgcctaccaaagc
gccagtgtgttgcccgtactgcatttgaaaaccatgttagccgacctggcttttggttat
tacgaaacccccagcgatgcgatgaccattattgcggtgacgggcaccaatgggaaaacc
actgttacccgctggttggcgcaggcactcaatcatcttggcaagaaagccgctgtgatc
ggcactttgggttatggcgagccggatcaattgaaggctcacaccggtttgaccactcca
gatgtggtgggtgttcatcacctgctgcatgaattgcgtcaacaccagttcgacacggtt
tgcattgaagcttcgtcgatcgggcttgagcagcgtcggctggcctgtgtcagcatcgat
gtcgcgctctttaccaatctatctcaggatcacctggactatcacggggacatggccgcg
tatggccgttccaaaatgattctggccagctggccgactttgcggttggcggtggtcaat
gcggatgattctttcggcatggagtttttggccaatgtgcagcgcagaaatattgattgc
tccgctgtaggacgcgctgacagtgctgagtgccaaattctgagtgttgcccatcaagaa
aacggccaacgcattgaattgaaaatcaacggtgcaagcacccagatcgacacgtccatt
attggcgaattcaatgctgacaatatggcattggtgtttgcgactttgataaggcttggg
tacgacgcaagccaggtgaagagcgctttggcaggggttactccagcacctggacgcatg
cagcacattgaaggcgaaccggcggtggttgttgattacgcgcacaccccagatgcactg
gaaaaaacactactggcgcttcggccatttgccaacaaacgccaaggcaagctgtgggtg
gtgtttggttgtggtggcgatcgggatcgcagcaaacgccctttgatgggagctgcggca
gctgacaaagccgatttcgtggtggttacctcagacaacccacgcagtgaaaaaccagaa
aacattctgcaagagatagtggatggaatcgacaaggcccggcaggacaaacttcatgtc
gaggttgatcgcgtgcgggccattgaatttgccgttgccaaagcgagcgccaaagatgtc
gtgttattggctggcaaggggcacgaaagtactcaaacgattggtgcacaagtaattgcg
cattcagatgtgcagtgcgcgatgaccgcgctgggcaagcgaggtgcgcatgcttga
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