Limnohabitans sp. TEGF004: LTEGF4_13640
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Entry
LTEGF4_13640 CDS
T11140
Name
(GenBank) hypothetical protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt01501
beta-Lactam resistance
limt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LTEGF4_13640
01503 Cationic antimicrobial peptide (CAMP) resistance
LTEGF4_13640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
limt03036
]
LTEGF4_13640
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limt02000
]
LTEGF4_13640
01504 Antimicrobial resistance genes [BR:
limt01504
]
LTEGF4_13640
Chromosome and associated proteins [BR:
limt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LTEGF4_13640
Transporters [BR:
limt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LTEGF4_13640
Antimicrobial resistance genes [BR:
limt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LTEGF4_13640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
HH_MFP_RND
BSH_CusB
RND-MFP_C
CzcB_C
HH_EMRA
Beta-barrel_YknX
Motif
Other DBs
NCBI-ProteinID:
BDU55683
LinkDB
All DBs
Position
complement(1433780..1435240)
Genome browser
AA seq
486 aa
AA seq
DB search
MASKKMYSVVAVVGIGVASTLAWWLQAPKSDAGAATGVRPSGVEITQVKKQTLRDDAEAV
GTLRSSQNVMLRPEVAGRVLSLGFADGARVRAGQVLVQMDDTLQRAEVQQSLAQMSIAKA
NHKRNQELVAQNFIAQRSLDESAAALQVSEAQLGLSCARLDRMRLIAPFNGVVGIRNVNV
GDYVKDGADLINLENIGSLYVDYRLPERYQTKVMPGQTIEVKLDAFSGRLFKAKVEAVDP
LIDANGRSIGVRAVLANTAGEPIAAAGGKGPAAQASSAPVASASTPAVAAKPAASAPVVA
SGAMRGVALPSPQSLGCPSNAFDRTRINAGGEQNGPLRPGMFARVTAVFAVRPNALIVPE
EAIVPQGGKQFVIKAVAPSELPAPAASAAASAPVLPPDTKLVSQRVEVKLGLRRGGQVEI
TEGLAEGDTIVVAGQQRLQKDGSPLRVVELGRGPANPASAPASASGAASGASGADAASAA
SQAASR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaaagatgtattccgttgtggcagtcgttggcattggggtggcctcgacc
ttggcttggtggttgcaagcgcccaagtctgatgctggcgctgcgacgggcgtgcgtccc
agtggcgttgaaatcacccaagtcaaaaaacaaaccttgcgtgacgatgccgaggccgtg
gggactttgcgttcatcacaaaacgtgatgctgcgccccgaagtggcgggccgtgtgttg
tcgttgggttttgccgatggcgcgcgtgtgcgcgctggccaagtgttggtgcaaatggat
gacaccttgcaacgcgcggaggtgcagcagtctctagcccagatgtcgattgccaaggcc
aaccacaaacgcaaccaagaactggtggcgcaaaacttcatcgcccagcgctcactcgac
gaaagcgcagcggccttgcaagtgtcagaagcgcaactgggtttgtcctgcgcacgcttg
gatcgcatgcgtttgattgcgccgttcaatggcgtggtcggtattcgcaacgtcaacgtg
ggtgactacgtgaaagatggcgcggatttgatcaaccttgaaaacatcggcagcttgtat
gtggactaccgcttgcccgagcgctaccaaaccaaggtgatgccaggccaaacgattgag
gtcaaactcgatgcgttcagcggccgattgttcaaagccaaggtcgaagcggtggaccct
ttgattgacgcgaatggccgctccatcggcgtgcgtgcggtgttggccaatacggcgggt
gagcccatcgctgctgcgggtggcaaaggcccagcggcacaggcgtccagcgcgcccgtt
gcctcggcttcaacccctgccgtcgctgccaaaccggcggcctctgcacccgtggttgcc
tctggagcgatgcgtggtgttgctttgccttcgcctcagagcttgggttgtcccagcaat
gcgtttgatcgcacacgcataaatgccggtggtgagcaaaacggccccttgcgcccgggc
atgtttgcgcgtgtgacagctgtgtttgctgtgcggcccaacgccttgatcgtgccggaa
gaggccatcgtgccgcaaggcggtaaacagtttgtcatcaaagctgtggctccttctgag
ttgcctgcacctgctgctagcgctgcggcaagtgcacctgttttgccgcccgataccaaa
ctggtgtctcagcgcgtagaagtgaaattgggtctgcgccgtggtggccaagtggagatc
accgagggcttggctgaaggcgacaccatcgtggtcgccggtcagcagcgtttgcaaaaa
gacggctctcccttgcgtgtggtggagttgggtcgtggtccagccaacccggcatcagcg
cctgcctctgcatcaggtgcagcttctggtgcatcgggggctgatgccgccagtgccgcc
tctcaagccgccagccgctaa
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