Limnohabitans sp. TEGF004: LTEGF4_20830
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Entry
LTEGF4_20830 CDS
T11140
Symbol
ileS1
Name
(GenBank) isoleucine--tRNA ligase 1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LTEGF4_20830 (ileS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limt01007
]
LTEGF4_20830 (ileS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limt03016
]
LTEGF4_20830 (ileS1)
Enzymes [BR:
limt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
LTEGF4_20830 (ileS1)
Amino acid related enzymes [BR:
limt01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LTEGF4_20830 (ileS1)
Transfer RNA biogenesis [BR:
limt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LTEGF4_20830 (ileS1)
Prokaryotic type
Other AARSs
LTEGF4_20830 (ileS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
BDU56402
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All DBs
Position
2146198..2149089
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AA seq
963 aa
AA seq
DB search
MTDKATPTSTDYRSTLNMMDTPFPMRGDLPKREPAWAKQWNEQGLYKKLRVARQGAPLFV
LHDGPPYANGKLHIGHALNKVLKDMIVKSKQLGGFDAQYIPGWDCHGLPIENAIEKLHGR
KLSRDDMQAKSRAFATEQIDQQREDFKRLGVLGDWERPYRTMDPANEAGQLRAFKRVMER
GFVYRGLKPVYWCFDCGSSLAEFEIEYADKKSDTLDVAFLCAQPEKLAAAFGLPKLYKEA
FAVIWTTTAWTIPANQALNMHPEINYALVDTERGLFLCAASLVEKCLERWKLEGKVVATA
TGNKLGLIEFNHPLSHVDAGYKRTAPVFLADYVGESDGTGIVHSAPAYGVDDFNSCMANG
MKYTDILNPVQGNGAYAADFPLFGGQHIWKAVPVILETLQNAGRLMATQTITHSYPHCWR
HKTPVIYRAAAQWFIRMDAFDSTTEKTTGKFITDKSSKSLRELALHAIDQTHFYPENGRA
RLRDMIANRPDWCISRQRSWGVPVPFFLHKDSGELHPRTMAIMDQAADIVEKGGIEAWSR
VTVEDILNQPGDDAASYTKSTDILEVWFDSGSTFQHVLRGSHKDAYDRAPHHDQGPEADL
YLEGHDQHRGWFHSSLLLGCALYDRAPYKGLLTHGFATDGQGRKMSKSLGNTVAPQEVSD
KMGAEIVRLWVASTDYSGDLNIDDKILARVVDAYRRIRNTLRFLLANVSDFDPTKDAVAF
DDLLEIDKYALSRAAQVQADIRAHFDAYEFHPVVSKLQLYCSEDLGAFYLDVLKDRLYTT
APKSLARRSAQTALHQITHAMLRWMAPFLSFTAEEAWTTFGKSESIFLETFTNLGASNAA
LMDKWGNIQQIREIANKKIEDKRTEGSVGASLQAELIIHCDDAAYDALASLGDDLKFVFI
TSKVSLVKVAGAGLTVEVKASEATKCERCWHYSDDVGHNSAHPTLCGRCDSNLHGDGEVR
HFA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaagccaccccaacttccacggactaccgttccacgctaaacatgatggac
accccgttccccatgcgtggcgacttgcccaaacgcgaacccgcttgggccaagcaatgg
aacgagcaaggcttgtacaaaaaactgcgcgtggctcgccaaggtgcaccgctgtttgtg
ctgcacgacggcccgccctacgccaacggcaaactgcacatcggccacgcactgaacaaa
gtgctgaaggacatgatcgtcaagtccaagcaattgggcggctttgacgcgcaatacatt
cccggctgggactgccacggtttgcccatcgagaacgccatcgaaaaactacacggtcgc
aaactcagccgcgacgacatgcaggccaagagccgcgcattcgccaccgagcaaattgac
caacaacgcgaagacttcaaacgcttgggcgtgttgggggactgggagcgcccctaccgc
accatggaccctgccaacgaagccggccaactgcgcgccttcaaacgcgtgatggaacgt
ggctttgtgtaccgtggcctgaagcccgtgtactggtgttttgactgcggctcatctttg
gccgagtttgaaattgaatacgccgacaagaagagcgacacgctcgacgtggctttcttg
tgcgcccagcccgaaaaactagctgctgcgtttggtttgcccaagctctacaaagaagcg
tttgcagtcatctggaccaccaccgcgtggaccatccctgccaaccaagcgctcaacatg
caccccgaaatcaactacgccttggtcgacaccgagcgtggtttgttcttgtgcgcagct
tcgttggtcgagaaatgtttggagcgttggaagctcgaaggcaaagtggtggccacagcc
acgggcaataagctcggacttattgagttcaaccacccactgtcacatgtggacgctggc
tacaaacgtaccgcccccgtgttcttggccgactacgtgggcgagagcgacggcacaggc
atcgtgcacagcgcacctgcctacggcgtggatgacttcaactcatgcatggccaacggc
atgaagtacaccgacatcttgaaccccgtgcaaggcaacggcgcgtatgccgctgacttc
ccgttgttcggtggccagcacatttggaaagctgtgcccgtcattctggaaaccttgcaa
aacgcaggccgcttgatggccacacaaaccatcacgcacagctacccacattgctggcgt
cacaaaacacctgtcatctaccgcgcagcggcgcagtggttcatccgcatggatgcgttt
gacagcaccaccgaaaaaaccacgggcaagttcatcaccgacaagtcaagcaagtcgctg
cgcgaactcgcgttgcacgcgattgaccaaacgcacttctacccagaaaacggccgcgca
cgtttgcgcgacatgattgccaaccgtcccgactggtgcatctcgcgccaacgcagctgg
ggtgtgcccgtgccgttcttcttgcacaaagacagcggcgagttgcacccacgcaccatg
gccatcatggaccaagcagccgacatcgttgaaaaaggcggcatcgaagcatggagccgc
gtgacggtggaagacatcctcaaccagcccggcgacgacgcagccagctacaccaagagc
accgacatcttggaagtgtggtttgactctggctcgaccttccaacacgtgctgcgcggc
agccacaaagacgcgtacgaccgcgcaccgcaccatgaccaaggcccagaagctgatttg
tatttagaaggccacgaccaacaccgcggctggttccacagctcgctgttgctcggctgc
gccttgtacgaccgagccccctacaaaggcctgctgacccacggctttgccaccgacggc
caaggccgcaagatgagcaagagcttgggcaacaccgtcgcgccgcaagaagtgagcgac
aagatgggcgcagaaatcgtgcgcttgtgggtggccagcaccgactactcgggcgacctg
aacatcgacgacaaaatcttggcccgcgtggtcgatgcgtaccgccgcattcgcaacacg
ctgcgcttcttgctcgccaacgtgagcgactttgacccaaccaaagacgccgtggcgttt
gacgacttattggaaatcgacaagtacgcgttgtcacgcgctgcgcaagtgcaagccgac
attcgcgcgcacttcgatgcgtatgagttccaccccgtggtgtcgaagttgcagctgtat
tgttcggaagatttgggcgcgttctatttggacgtgctcaaagaccgcctgtacaccaca
gcgcctaagtcactcgcacgtcgcagcgcacaaactgcgttgcaccaaatcacccacgcc
atgctgcgttggatggctccattcctcagcttcaccgctgaagaagcgtggaccacgttt
ggcaagtctgagtcgatcttcttggagacattcaccaaccttggcgcaagcaatgcagcg
ttgatggacaagtggggcaacatccaacaaattcgcgaaatcgctaacaaaaaaatcgaa
gacaaacgcacagaaggatctgtgggtgcgtcactgcaagctgaactcatcattcactgc
gatgacgctgcgtatgacgcgttggcctcattgggcgacgacttgaagtttgtgttcatc
acatcaaaggtttctttggtgaaggttgcaggcgcaggtttgaccgttgaagtcaaagcc
agcgaagccaccaagtgcgagcgttgctggcactacagcgacgacgttggccataactcc
gctcaccccacactctgcggccgttgcgacagcaacttgcacggtgacggtgaagtgcgt
cacttcgcttaa
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