Lawsonia intracellularis PHE/MN1-00: LI0778
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Entry
LI0778 CDS
T00354
Symbol
nth
Name
(GenBank) endonuclease III, putative
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LI0778 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lip03400
]
LI0778 (nth)
Enzymes [BR:
lip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LI0778 (nth)
DNA repair and recombination proteins [BR:
lip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LI0778 (nth)
Prokaryotic type
LI0778 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
CAJ54832
UniProt:
Q1MQ95
LinkDB
All DBs
Position
complement(966810..967460)
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AA seq
216 aa
AA seq
DB search
MIKENTIKKQRAACVLSLLKKRYPTFETHLVASNPWELLIATILSAQCTDARVNQVTPIL
FTRWPDPSALALAMLEEVEQVIRTTGFYKSKAKHIIETAKRIMYNYNGVVPQTMDELITL
PGVARKTANVVLWGGFGINVGIAVDTHVKRISYRLGLTANKDPSLVEKDLMNLFPQSEWG
AINHRMVWFGRHVCKAKNPLCTLCEMNTFCPHNGIK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaaaatacaataaaaaagcagcgtgcagcttgtgtattatcactattaaaa
aaaagatatcctacctttgaaacacatttagtagcaagcaatccttgggagttactaata
gcaacaattttatcagcacagtgtacagatgcacgtgttaatcaagttactcctatttta
ttcacacgttggcctgacccttctgctttagctttagcaatgttagaggaggttgaacaa
gtaataagaacaacaggtttttataaaagtaaagcaaagcatattatagaaacagctaaa
cgtattatgtataattataatggagtagtaccacagactatggatgaacttatcactctt
ccaggagtagcacgtaaaactgctaatgttgttctttggggtggatttggtattaatgtt
ggtattgctgttgatacacatgtaaagcgtatttcctatcgtttaggtttaacagcaaat
aaagatccatctttggttgagaaagatttaatgaatttgttcccccaaagtgaatggggt
gctataaatcatagaatggtttggtttggtaggcatgtatgtaaagcaaaaaatccacta
tgtactctttgtgaaatgaatacattttgtccacataatggtataaaatag
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