Lactobacillus intestinalis: KBW87_04125
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Entry
KBW87_04125 CDS
T08339
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBW87_04125 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_04125 (nth)
Enzymes [BR:
liq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KBW87_04125 (nth)
DNA repair and recombination proteins [BR:
liq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KBW87_04125 (nth)
Prokaryotic type
KBW87_04125 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
Q_salvage
HHH_8
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
UTW39625
LinkDB
All DBs
Position
906166..906795
Genome browser
AA seq
209 aa
AA seq
DB search
MSDKLLSDEEALDILNRIDQLYPNAKGELNWDNHFHLLCAVLMSAQTTDKMVNRVMPKFM
QDFPTAESLANTSIERIEADIRQIGLYHSKAKHLKESAQILVEKYGGNIPKSKKELMELP
GVGEKTANVVLAEGFGVPAIAVDTHVSRISKKFHIVNQKATPHEVEKRLESLLPEDRWIK
THHAMILFGRYTMPSRAKNDPYSYLPPKK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaactgctaagcgatgaagaagccttagatatactaaatcgaatcgatcaa
ctatatccaaatgctaaaggggaattaaattgggataatcattttcatctcctatgtgcg
gttttaatgagtgcacaaacaactgataaaatggtaaatcgtgtaatgcccaaatttatg
caggattttccaactgccgaatctttagcaaataccagtattgagcgtattgaagcagat
attcgtcaaattggactctatcattctaaagcaaaacatttaaaagaatcagctcaaatt
ttagttgaaaaatatggcggcaacatccctaaaagtaaaaaagaattaatggagcttcca
ggagtaggagaaaagacagctaatgtagttttagctgaaggattcggcgttcctgcaatt
gctgtcgatactcacgtatcaagaatttctaaaaaattccatatcgtaaatcaaaaagcc
acgccacacgaagttgaaaaacgtttagaatctctattgcctgaagatagatggatcaaa
actcatcatgcaatgatcctttttggaagatatacaatgccatctcgagctaaaaatgat
ccatattcttatttaccacctaaaaagtaa
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