Limnospira indica: H2674_26240
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Entry
H2674_26240 CDS
T10214
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lix Limnospira indica
Pathway
lix01501
beta-Lactam resistance
lix01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lix00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H2674_26240
01503 Cationic antimicrobial peptide (CAMP) resistance
H2674_26240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lix03036
]
H2674_26240
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lix02000
]
H2674_26240
01504 Antimicrobial resistance genes [BR:
lix01504
]
H2674_26240
Chromosome and associated proteins [BR:
lix03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H2674_26240
Transporters [BR:
lix02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H2674_26240
Antimicrobial resistance genes [BR:
lix01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H2674_26240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_YBHG
YknX_C
BSH_RND
Beta-barrel_RND
BSH_CusB
RND-MFP_C
BSH_CzcB
Biotin_lipoyl
CzcB_C
BSH_YhbJ
Beta-barrel_RND_2
HH_MFP_RND
BSH_Fcp1
BSH_YknX
DUF1090
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QNH57533
LinkDB
All DBs
Position
complement(5841932..5843506)
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AA seq
524 aa
AA seq
DB search
MSYPSSESSNPNYHQSVVAVEGIPEQSQREDQKQIESDRHSESEPSNKSGLVSATVGILL
ALGVGFAGGQWWHSSKAQADTTPAAATNSPQRPRGVPVRVASIETRNFQDAGEFVGTLQA
RESVEVRSEIDGRITQVYVRSGEMVNQGQAIARLRSDDLEAQLRQAQANLVRTQARVSEL
QAGSRPEEIAEARARLGESIARLSDAESGSLLAEINQAKAQIDANIAAAELAEKRVTRFQ
ELTEAGAISRDEFDALVSQKQTAQANLRASERRLEQLQQNRQSEIALRQAGVEQSEQALR
RLESGTRPQEIDQAEAQVAEAAARVRQLEVQLQETTVQAPFTGIVGDVTARPGDFVSRGG
TLTTLTENDRLELRLSIPLERQGDLREGLAVEMQDPQGEPIGTGRISFISPTVDPNSQSI
LAKATFTNPDGLLRTGQFVRARVIWNEKPNTVVVPMTAVQFSGDERFVFTTEGGENPTAK
RQVIRLGLIRDQYAEVVEGLRPGEKLIVSGIQRLSDGAAINPQN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatccatcatcagaatcatcaaacccgaattatcatcagtctgtcgtggcagtt
gaggggatacctgaacagtcacaaagagaagaccaaaagcagatagaaagcgatcgccat
tcggaatcagaacctagtaataaatcgggtttggtatcagccacggtaggaatattactc
gccctaggagtaggctttgctgggggtcaatggtggcattctagtaaagcgcaagcggac
actaccccagcggcggcgactaattccccccaaagaccgaggggagttccggtgagagta
gccagcatagaaactaggaactttcaggatgctggggaatttgtgggaacgctacaagcg
cgggagtcggtggaagtaagatcggaaatagacgggagaatcacccaagtatatgttagg
tcaggggaaatggtaaatcaagggcaggcgatcgcccgtttaagaagtgatgacctagaa
gcgcaactgcgacaagcccaagccaacctagtacgaacccaagccagagtatcagaatta
caagccggaagtcgcccggaagaaattgcggaagcccgtgcgagattaggggaatctatc
gcccgcctaagtgatgcggaatcgggtagtttactggcagaaatcaatcaagcgaaagcc
caaatagatgccaatatagcagcagcagaattagcggaaaaacgggtaactagatttcaa
gaactcacggaagccggggcaatttccagagatgaatttgatgctttagtgtcgcaaaaa
caaaccgcccaagccaacctgagagcatccgaaagacgactagaacaattgcagcaaaat
cgccaatcagaaatagccctgagacaagcgggagtcgaacaatctgaacaggcgttaaga
cgattagaaagcggcacgagaccccaagaaatcgaccaagcggaagcccaagtagcggaa
gccgccgcccgtgttcgccagttagaagtgcagctacaagagacgactgtacaagcacct
tttacggggatagttggtgatgtgacggcgagaccgggagactttgtgagccggggtggg
accttaaccaccctcacagaaaacgatcgcctagaattgagattatctattcccctagaa
cgccaaggggacctacgagagggactagcagtagaaatgcaagacccccaaggtgaacct
ataggaaccggacgcattagctttatttccccgacggtagatcctaattctcaaagtatc
ttagccaaagcgacatttactaatcctgacggactcctccgtactggtcaattcgtgagg
gcgcgggtaatttggaatgaaaaaccaaacacagtagttgtacccatgaccgccgtacaa
ttttcgggagatgaaaggtttgtatttaccacggaagggggagaaaatcccaccgccaaa
agacaggtaattcgcttaggtttaattagggaccaatatgcggaagtggtggaaggttta
cgaccgggtgaaaaactgatagtttccggtattcaaagactgtcagatggtgcagctatc
aatcctcaaaattaa
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