Lichenihabitans sp. PAMC28606: LGH83_00580
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Entry
LGH83_00580 CDS
T07621
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00300
Lysine biosynthesis
liz00550
Peptidoglycan biosynthesis
liz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LGH83_00580
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LGH83_00580
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
LGH83_00580
Enzymes [BR:
liz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LGH83_00580
Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
Precursor biosynthesis
Amino acid ligase
LGH83_00580
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UDL96805
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Position
complement(130943..132337)
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AA seq
464 aa
AA seq
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MDIAALASDSRAVVPGTLFFAVPGTRQDGSAFIPQAIQRGAAAIVMEAGAAPITSAVPLI
EVPDIRVALATAAAVFTPGQPGTIVAVTGTSGKTSVTAFLRQMWTILGQRAASLGTIGVV
APSGAVYGSLTTPDPITLHATLDKLSREGVTHLAVEASSHGLDQHRLDGLRLAAGGFTNL
SHDHLDYHADLADYLRAKLRLFDTLLPAGGAAVIDADSDVAPTVISAARARGLRVSTTGR
AGHDLRLISAEPEGFDTLLSIAHAGHAFAVRLPLAGAFQVANALLAAGLCIATGSEPEAV
FGSLKRLEGAPGRLERVGSHKGAPIFVDYAHKPDALDKILETLRPYARGRLTVVFGCGGD
RDAAKRPLMGAIAARRADRVIVTDDNPRSEDPAAIRHAILAAAPDAIEIADRGAAIRIAV
ADLCDGDVLVVAGKGHETGQIVGGTVLPFSDHETILAAIAEAQR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgcggctttggcgtctgacagccgcgccgtggtgccgggcacgctgttcttc
gccgttcctgggacccgacaggatggatcggctttcattccgcaggcgatccagcgcggg
gccgccgccatcgtgatggaagccggcgccgcgccgatcacatccgccgtgccgctcatc
gaggttcccgacatccgcgtcgcgctcgctacggctgcggcggtcttcacgcccggccag
cccggcaccatcgtggccgtcaccggcaccagcggcaaaacctccgtgaccgcctttctg
cgccagatgtggacgatcctcggccagcgggcagcctctctcggcaccatcggggtcgtg
gctccgagcggcgcggtctatggctcgctgacaacacccgatccgatcacgcttcatgcg
acgctcgacaaactcagccgcgagggcgtcacccatctcgcggtggaggcctcctcgcac
ggtctcgaccagcaccggctggacgggctgcggctcgcggcgggcggcttcaccaacctg
tcgcacgatcacctcgattatcacgccgacctcgccgattatctccgggccaagctccgc
ttgttcgacacgctgctgccggctggtggcgccgccgttatcgacgcggatagtgatgtc
gcaccaaccgttatctcggcggcgcgggcacgcggcttgcgggtgtcgactacgggccgc
gccggccatgatcttcgcttgatctcggccgaacccgagggattcgacacacttttgagc
atcgcacatgcaggccatgccttcgctgttcggctgccgctcgccggcgcgtttcaggtc
gccaacgccctgctggcggcgggcctctgcattgccacgggcagcgagcccgaggcggtt
ttcggaagcctcaaacggctcgagggcgcgccgggccgtctcgaacgggtcggcagccac
aagggcgcgccgatcttcgtcgactatgcccacaagccggatgcgctcgacaagatcctc
gaaaccctgcgtccctatgcgcgcggccgcttgacggtcgttttcggctgcggcggcgat
cgtgacgcggccaagcgtcccttgatgggcgctatcgcggcgcggcgggccgatcgcgtc
atcgtgacggacgacaatccccgctcggaagatccggccgccatccggcacgccatcctg
gcggccgcgccggacgcaatcgaaatcgccgatcgtggcgcggcgatccgcatagccgtt
gccgacctctgcgacggcgacgtgttggtggtggccggcaaaggacacgagaccggccag
atcgtcggcggaaccgtgctgcccttttcggaccacgaaaccattctggccgccatcgcg
gaggctcaacgatga
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