Lichenihabitans sp. PAMC28606: LGH83_02540
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Entry
LGH83_02540 CDS
T07621
Symbol
metC
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00270
Cysteine and methionine metabolism
liz00450
Selenocompound metabolism
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LGH83_02540 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LGH83_02540 (metC)
Enzymes [BR:
liz01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
LGH83_02540 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UDL95139
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Position
535964..537148
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AA seq
394 aa
AA seq
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MTKLTPDTRATLGSRSRLIHAGRDPEEQHGFVNTPIYRGSTVLYDNVAQLQNRERRFTYG
TKGTPTTEALETAWSELAGAAGTVLTPSGLAAVTVALMSVLGSGDHILVTDSAYLPTRHF
CDTMLRRFGVSTTYYDPLIGTRIADLFQPNTRAVLVEAPGSQTFEMQDIPAIAEAAHAHD
ICVIMDNTWATPLFFPPHARGVDIAIEAGTKYLSGHSDLLLGLTSANAAYWPKLRETFDA
FAICAGPEDVFLGLRGLRSMDLRLREAERQALAMAHWFDSREEVRQVLHPALPSHPGHAI
WKRDFLGSSGLFSIILEPASTDAVAAMLDGLELFGMGFSWGGYESLVIPFDPTTYRTATS
WNPGGPTLRFQIGFEDLADLQADLDRGFARLRQA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacttacgccggacactcgcgcgactctcggctcgcgctcgcggctcattcat
gccgggcgcgaccctgaggagcagcatgggttcgtcaatacaccgatctatcgcggctcg
acggttctgtacgacaatgtcgcacaattgcagaaccgcgagcgtcggttcacctatggg
acgaagggcacgccgaccaccgaagcgctggagacggcgtggagcgaactcgctggcgca
gccggaacggtgctaacgccctcgggccttgcggccgtgaccgttgcgttgatgtcggtc
ctcggcagtggcgaccacatcctggtcaccgactcggcctatctgccgacacggcatttc
tgcgacacgatgctgcggcgcttcggcgtttcgacgacctactacgatccgctgatcggg
acccggatcgccgacctgtttcagccgaacacccgtgcggttttggtggaagcgcctggg
tcgcagaccttcgagatgcaggatatccccgccatcgccgaggcagcgcatgcgcatgat
atctgcgtcatcatggacaatacctgggcgacacccctgttctttccgccccatgcacgc
ggggtcgatatcgccatcgaggccggcacaaaatacctctccggccattccgacctgttg
ctcggcttgacatccgccaatgcggcatactggccgaagctgcgtgagaccttcgacgcc
tttgcgatatgcgccgggcccgaagatgtgtttctgggcttgcgcggacttcgaagcatg
gatttgcggctccgcgaggccgagcgccaagcgctcgctatggcacactggttcgacagt
cgcgaggaggtgcgtcaggtgctgcatcccgccctgccgagccatcccggacacgcgatc
tggaagcgcgacttccttgggtcgtcgggtttattctcgatcattctcgaaccggcatcc
acggatgctgtcgcggcgatgctcgatgggctcgaacttttcgggatgggcttctcctgg
ggcgggtacgaaagcctcgtgatcccgttcgatccgacaacctatcgaaccgcgacctcc
tggaacccaggtggacccaccctgcgatttcagatcgggtttgaagatctcgccgatctt
caggccgacctcgaccgtggcttcgcccgcctgcgccaggcctga
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