Lichenihabitans sp. PAMC28606: LGH83_16425
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Entry
LGH83_16425 CDS
T07621
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00270
Cysteine and methionine metabolism
liz00450
Selenocompound metabolism
liz00670
One carbon pool by folate
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01230
Biosynthesis of amino acids
liz04980
Cobalamin transport and metabolism
liz04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LGH83_16425 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LGH83_16425 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LGH83_16425 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LGH83_16425 (metH)
04980 Cobalamin transport and metabolism
LGH83_16425 (metH)
Enzymes [BR:
liz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LGH83_16425 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Urocanase_C
Motif
Other DBs
NCBI-ProteinID:
UDL94100
LinkDB
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Position
complement(3477790..3481515)
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AA seq
1241 aa
AA seq
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MTTTAQALRDAAAERILVLDGAMGTMIQERRFDEAAFRAERFKHWPSDLRGNNDLLTLTQ
PDAIRDIHLQYFLAGADIVETNTFSSTTIAQADYGMEAIAVELNREGARLAREAADLAEA
KDGRKRFVAGAIGPTNRTASISPDVNNPGYRAVTFDELRIAYGDAARGLIEGGADIIIVE
TIFDTLNAKAALAGIDEIFEEIGRTLPVMISGTITDLSGRTLSGQTPTAFWNAVRHASPF
TVGLNCALGAREMRAHLSEISRAADTLVCAYPNAGLPNEFGMYDESPDYMAELVGEFAES
GLVNVIGGCCGTTPAHIRAIAARVKGLAPRVVPTIEPMLRLSGLEPFTLTSDIKFVNVGE
RTNVTGSARFRKLIREGDLAAALDVARDQVANGAQIIDINMDEGLLDSEKAMVDFLNLVA
AEPDIARVPVMVDSSKFGIIVAGLKCVQGKPIVNSISLKEGETKFIADARIVRRYGAAVV
VMAFDEEGQADTQKRKIEICSRAYKILTETVGFPPEDIIFDPNVFAVATGIEEHNNYGVD
FIEATRAIRANLPYAHISGGVSNLSFSFRGNEKVREAMHAVFLYHAITAGMDMGIVNAGQ
LAVYGEIDPDLREACEDVVLNRRADSTERLLALAELYKGQDGQVAKAKDLTWREAPVAKR
LEHALVNGITEFVDADTEEARVAAKRPLDVIEGPLMSGMNVVGDLFGTGKMFLPQVVKSA
RVMKQAVAVLLPYMEAEKLASGGGSGRSSAGKILMATVKGDVHDIGKNIVGVVLACNNYE
IIDLGVMVPAQKIIDVAIAEKVDAIGLSGLITPSLDEMCFVAAEMERQGLDLPLLIGGAT
TSRVHTAVKIHPHYERGQAVYVTDASRAVGVVSALLSPDTRVSYVETVRGEYRRVADAHA
KSERDKQRLPLAKARANALKIDWAGYEPPRPSFLGTRTFGSFDLATLAGFIDWTPFFQTW
ELKGRYPAILDDPKQGEAARNLFADAQAMLARIIEEKWFTPRAVIGFWPAQSVGDDIRLF
DDESGAHSETFFTLRQQLSKRDGRPNTALSDFVAPGDVGKRDYIGGFVVTAGSEEIAIST
RFAQANDDYSSILVKALSDRFAEALAEFMHERVRREFWGYAADEVLTDQQRLDETYRGIR
PAPGYPSQPDHTEKLTLFRLLDAEHAVGVRLTESLAMWPGSSVSGLYLAHPEAHYFGVAK
VERDQAEDYAARKGMPLREVERWLSPILNYDPLALAKEAAE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccacagcccaagcccttcgtgacgcagccgccgagcgcattctggtgctcgat
ggtgccatggggacgatgatccaagagcgccgtttcgacgaagcggcgttccgggcggag
cggttcaaacactggccgagcgacctgcgcggcaacaacgacctgctgacgctgacccaa
ccggatgcgatccgcgacattcacctgcaatattttctggccggcgccgatatcgtcgag
accaacacgttttcatccaccaccatcgcccaggccgactacggcatggaggcgatcgcg
gtcgaactgaaccgcgaaggcgcgaggctggcacgcgaagcggccgatctcgccgaagcg
aaggacggccgcaaacggttcgtcgcaggcgcgatcgggccgaccaaccgcaccgcgtcg
atctcgcccgatgtcaacaaccccggctaccgcgccgtcacgttcgatgagctacggatc
gcctacggggacgcggcgcgcggcctcatcgaagggggagccgacatcatcatcgtcgaa
accatcttcgacacgctgaacgccaaggcggctctggccgggatcgacgaaatcttcgag
gagatcgggcgcaccctgccggtgatgatctccggcaccatcacggatctctccggccgc
accctgtcaggccagaccccgacggcgttctggaacgcggtgcggcacgcctcacccttt
accgtggggctgaattgcgcgctcggcgctcgcgaaatgcgcgcccatctcagcgaaatc
agccgggccgccgatacgctggtctgcgcctatcccaatgccgggctgccgaacgaattt
ggcatgtatgacgagagccctgactatatggccgagctggtcggcgaatttgccgaatcc
ggcctcgtcaacgtcatcggcggctgctgtggcaccacgccggcccatatccgcgccatc
gcggcacgcgtcaaaggcctcgcgccccgcgtcgtgccgaccatcgagccgatgctgcgc
ctgtccggcctcgagcctttcacgctgacgagcgacatcaagttcgtgaacgtcggcgag
cgcaccaacgtcacgggttcggcccgcttccgcaagctgatccgcgagggcgatctcgcg
gcggcgctcgacgtcgcacgcgatcaggtcgccaatggcgcgcagatcatcgacatcaat
atggacgaaggcctgctcgattccgaaaaggcgatggtcgacttcctcaacctcgtggcg
gccgagccggatatcgcccgcgtccccgtgatggtcgatagttccaagttcggcatcatc
gtggccggcctgaaatgcgtgcagggcaagccgatcgtcaactcgatttcgctgaaggaa
ggcgagacgaaattcatcgccgacgcgcggatcgtgcgccgctacggtgcggccgtggtc
gtgatggccttcgatgaggaaggccaggccgacacgcagaagcgcaagatcgagatctgc
tcccgcgcctataaaatcctgaccgagacagtcggcttcccgcccgaggatatcatcttc
gatccgaacgtcttcgcggtcgcgaccggcatcgaggaacacaacaattacggcgtcgac
ttcatcgaagcgacacgtgcgatccgggccaacctgccctacgcgcatatctccggcggt
gtctcgaacctatccttctcgttccgcggcaacgagaaggtgcgcgaggcgatgcacgcc
gtgttcctctaccatgcgatcacggccggcatggatatgggtatcgtcaacgcggggcaa
ctcgcggtctatggcgagatcgaccccgacttgcgtgaggcctgcgaggacgtggtgctg
aaccggcgcgccgactcgaccgagcggctgcttgccctcgccgaactctataagggccag
gatggccaggtcgccaaagccaaggatctaacatggcgcgaggcgccggtcgccaagcgg
ctggaacatgcgctcgtcaacggcatcactgaattcgtcgacgccgatacggaggaggcg
cgcgttgccgccaaacgcccgctcgacgtcatcgaggggccgctgatgtccggcatgaac
gtggtcggcgacctgttcggaaccggcaagatgttcctgccgcaggtggtcaaatccgcc
cgcgtcatgaagcaggcggtggcggtgctgctgccctacatggaagccgagaagcttgcg
agcggtggcggatcgggccgaagttcggccggaaagatcctgatggcgaccgtcaagggc
gacgtgcatgacatcggcaagaatatcgtcggggtggtcctggcctgcaacaattacgag
atcatcgacctcggcgtgatggttccggcgcagaagatcatcgacgtcgcgatcgccgag
aaggtggatgcgatcggcctgtcgggcctcatcacgccgtcgctcgacgagatgtgcttc
gtggccgccgaaatggagcgccaagggctcgacctgccgctgctgatcggcggcgccacg
acgagccgcgtccatacggccgtcaagatccatccgcattacgagcgcggtcaggccgtc
tatgtcacggatgcgagccgtgccgtgggtgtcgtttcggcgctgctgtcgcccgacacc
agggtgagctacgtcgagacggtacggggcgaatatcggcgcgtcgccgacgctcatgcc
aagagcgagcgcgacaagcagcggcttccgctggccaaggcgcgcgccaacgcgctcaag
atcgactgggcgggatacgagcccccgcgaccgtcgttcctcggcacgcggacgttcggg
agtttcgaccttgcgacgctggcgggcttcatcgactggacgcccttcttccaaacctgg
gagctgaaaggccgctacccggccattctcgacgatccgaagcagggcgaagccgctcgc
aatctcttcgcggacgcgcaagccatgctggcacgcatcatcgaggagaagtggttcaca
ccgcgcgccgtgatcggtttctggcctgcccagtcggtcggcgacgatatccgcctgttt
gacgatgaaagcggggcgcatagcgaaaccttcttcacgctgcggcagcaattgagcaag
cgcgatgggcgccccaatacagcgctgagcgacttcgtggcgcccggcgatgtgggcaag
cgggattatatcgggggtttcgtggtcacggccgggtcagaggagatcgcgatctcgacc
cgtttcgcccaggccaacgacgattattcatcgatcctggtcaaagccttatcggaccgc
tttgccgaagcactggccgagttcatgcacgaacgggtgcgccgcgaattctggggctat
gcggccgacgaggttctgaccgaccagcagcggctcgacgagacctatcgcggcatccgc
cccgcgccgggctacccctcgcagcccgaccataccgagaagctcaccttgttccgcttg
ctcgacgccgaacatgcggttggggtgcggctgaccgaaagcctggccatgtggccggga
tcgtcggtttctggcctttatctcgcacatcccgaggcgcattatttcggcgtcgccaag
gtcgagagagatcaggcggaggattatgcggcccgcaagggaatgccgctccgcgaggtc
gaacgctggctgtcgccgatcctcaactacgatcccctggcgctcgccaaggaagcggcc
gaatag
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