Lichenihabitans sp. PAMC28606: LGH83_19795
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Entry
LGH83_19795 CDS
T07621
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz01501
beta-Lactam resistance
liz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LGH83_19795
01503 Cationic antimicrobial peptide (CAMP) resistance
LGH83_19795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_19795
01504 Antimicrobial resistance genes [BR:
liz01504
]
LGH83_19795
Transporters [BR:
liz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LGH83_19795
Antimicrobial resistance genes [BR:
liz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LGH83_19795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UDL94697
LinkDB
All DBs
Position
4205434..4208613
Genome browser
AA seq
1059 aa
AA seq
DB search
MVGFFTQRPIFASAVAVIMVMAGAICYLLLPVSQFPDITPPQVVISAVYPGASAQVVADT
VTTPLEQQINGVQGMTYMSSSSSNDGSSTITVTFDVGYPLSIAAVDVQNRVSQAASSLPA
IVNQAGVTIKKQNPNFVLIVNLTSPDGSIDPVALSNYAYLQIVDPLKRLPGVGDVQIFGE
RRYSMRVWLDPDRLANLGITAVDVQSAIAEQNVQVAAGKIGQSPAPAGTPFEMQVNAVGR
LSDPAQFGEIVVHADPATGSVVRLRDVARIELGALQYASTAFFGKDPTVVLAVYQMPGSN
ALDLQKNILNKMEELKKRFPKGIDYAMHYDTTRFVSASMHDVVITLGEALILVVMVVYIF
LQSWRTTIIPTIAIPVSLIATLAVMHVCGFSLNMLSLLGMVLAIGLVVDDAIVVVENVER
QLEAGLPPMEATRKAMSEVTGPIIATTAVLMAVFIPVAFIPGVAGRLYNQFALTVAISVG
ISAFNSLTLSPALAAVFLRHRPQQPFILFRWFNSGFEWLSHFYASMVRGLIAFRWALMLV
FAVGLVGTYMLWTRLPSTFLPVEDQGYFFVVIQGPDGSSLERTDVIAKQVRDVLQNEPGV
EIVGSISGLNFLTNAAQSNSAVEFAILKPWDERPPEQNASKIVAAVRPKLLGIPGAFALS
FDPPSIPGIGTTGGFEFEIEDLTGRGSVALNDATQAVLAEARKQPELNPQQLFSSFSTST
PQFNYDLDRNKAKLLGLSLPDVFNTLQIYLGSLYVNDFNLFGRTFRVTIQADKNARSGAA
DISRLYVRNSTGGMVPLSTLGTLKPIVGPETVPHYNNYASALINGGAAPGFSSGQAVAAM
ERAANAVLPRDFAFEWTGITFQELKAGSAASLIFGLAIVFVFLILAAQYESWSMPFMVLL
AVPLALFGALAALFVRGMQIDVYSQIGFVMLIGLAAKNAILIVEFAKRRREEGLSIVEAA
MEAGRLRLRPILMTAFAFILGVLPLTIATGAGAASRQSLGTTVFGGMLAATILTLIFVPV
FYAIIERMRERDPVVAADAVHAPKEPVRYGPEPHPHAAE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggtagggttctttacgcaacggccgatcttcgcttcggccgtcgcggtcatcatggtg
atggcgggggcgatctgctacctgctgctccccgtctcccaatttcccgacatcacgccg
ccacaggtcgtgatcagtgccgtttatcctggcgccagcgcgcaggtcgtggccgatacg
gtcacgacgcctctggaacagcagatcaacggtgtgcagggcatgacctatatgtcctcg
tcgagctccaacgatgggtcgtcgaccatcacggtaacgttcgacgtgggctatccgctc
agcatcgcggccgtcgacgtgcagaaccgcgtgtcgcaggccgcctcgtcattgcccgcc
atcgtcaatcaggccggcgtgacgatcaagaagcagaaccccaacttcgtcctcatcgtc
aatctgacctcgcctgacgggtcgatcgacccggtcgcgttgagtaattacgcctatctc
cagatcgtcgatccgttgaagcggttgccgggcgtcggtgacgtgcagatctttggcgag
cggcgctattcaatgcgggtctggctcgatcccgaccggctcgccaatctcggcatcacc
gccgtcgatgttcaaagcgccatcgcggaacagaacgtgcaggtcgcggccggcaagatc
gggcaatcccccgcgccggccggcaccccgttcgaaatgcaggtcaatgcggtcggtcgc
ctgagcgatccggcgcagttcggcgagattgtcgtgcatgcggatccggcgacaggctcc
gtggtgcggctgcgggatgtcgcccggatcgaacttggcgcgctgcaatatgcgtcgacg
gccttcttcggcaaggacccgaccgtggtcctggcggtctatcaaatgccgggctcgaat
gcgctcgacctgcagaagaacatcctgaacaagatggaggagctgaagaagcggttcccg
aagggcatcgattacgcgatgcattatgacacgacgcgcttcgtgtcggcctcgatgcac
gacgtcgtcatcacgctcggcgaggcgctgatcctcgtcgtcatggtggtctacatcttc
ctgcagagctggcgcacgaccatcatcccgacgatcgcgatcccggtttcgttgatcgcg
acgctggcggtcatgcatgtctgcggcttctcgctcaacatgctcagcctgctcggtatg
gtgttggcgatcggtctcgtggtcgacgatgccatcgtggtggtcgagaatgtggagcga
cagctcgaagcgggcctcccgcccatggaggcgacccgcaaggccatgtccgaggtgacg
gggccgatcatcgcgacgacagcggtgctgatggcggtgttcatcccggtcgcgttcatt
ccgggcgtcgcgggccgcctctataatcagtttgcgctgacggtcgcgatttcggtcggc
atctcggccttcaactcgctgacgctcagcccggctctcgcggccgtgttcctgcgccac
cgtccgcagcagccgttcatcctgttccgctggttcaacagcgggttcgagtggctctcc
cacttctacgccagcatggtgcgcggcctgatcgcgttccgctgggccttgatgctcgtc
ttcgcggtcggtcttgtgggcacctacatgctgtggacgcggctcccgagcaccttcctg
ccggtcgaagatcagggttatttcttcgtggtgatccaggggccggatggctcgtcactg
gagcgcacggacgtcatcgccaagcaggtgcgggacgtgctgcagaacgagccgggtgtc
gagatcgtcggctcgatcagcggattgaacttcctgaccaacgcggcgcaatcgaattcg
gctgtcgagttcgctattctcaagccgtgggacgagcggccgcctgaacagaatgcatcg
aagatcgtggcggctgtccggccgaagcttctcggcattcccggcgccttcgcgctcagc
ttcgatccgccgtcgatccccggcatcgggaccacgggcggcttcgaattcgaaatcgag
gatctgacggggcgcggcagcgtcgcgctcaacgatgcgacgcaggcggtgctggccgaa
gcgcgtaaacagcccgaactgaacccacagcagttgttcagctcgttcagcacctcgacg
ccgcaatttaactacgatctcgatcggaacaaggccaagctgctcgggttgagcctgccg
gatgtgttcaacacgctgcagatctatctcggctcgctctacgtgaacgacttcaacctg
tttggacggacgttccgggtcacgatccaggccgacaagaatgcgcggtcgggcgctgcc
gatatctcgcgcctctacgtccgcaactcgaccggcggcatggtgccgctctcgacgctc
gggaccttgaagccgatcgtcgggcccgaaaccgtgccgcattacaacaactatgcgtct
gcgctcatcaacggcggcgccgcgccgggcttcagttcggggcaggccgttgcggcgatg
gagcgggccgccaatgcggtgctgccgcgtgacttcgcgttcgaatggaccggcatcacg
tttcaggaactcaaggccgggtcggccgccagcctcatcttcgggcttgcgatcgtgttc
gtgttcctgatcctcgctgctcaatacgaaagctggtccatgccgttcatggtcctgctg
gcggttccgctcgccctgttcggggcgcttgcggcgctgttcgtgcgcggcatgcagatc
gacgtctactcgcagatcggcttcgtgatgctgatcggcctcgcggccaagaatgcgatt
ttgatcgtcgaattcgccaagcgccgtcgcgaggaaggcctgagcatcgtcgaggccgcc
atggaggcgggtcggctgcgcctacgcccgatcctgatgacggcctttgcgttcatcctc
ggcgtgctgccgctcacgatcgcgaccggggcgggcgccgcgagccggcagtccctcggc
accacggtatttggcggcatgttggccgccaccatactgacgctgatcttcgtgccggtg
ttctatgccatcatcgagcggatgcgcgagcgtgaccccgtggtcgcggccgacgctgtc
cacgccccgaaggagccagtccgttatgggccggagcctcacccccatgcggccgaatga
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