Lotus japonicus: 130716782
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Entry
130716782 CDS
T04348
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
KO
K12126
phytochrome-interacting factor 3
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
lja04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130716782
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
130716782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130716782
Transcription factors [BR:
lja03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130716782
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
DUF5577
Motif
Other DBs
NCBI-GeneID:
130716782
NCBI-ProteinID:
XP_057422774
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All DBs
Position
5:complement(54545595..54547822)
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AA seq
304 aa
AA seq
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MAATGKKALHHFVVIKGSSHALTTLQGQKPLISDAQSEAVVGHNKTSSLARLKAKGKAHS
NYHDEPLLVSSSFGYSNNTNLKRKHDEATCLSDNDEEPEYAVKEKLAGKGTKVKRSRNAD
THSLYERKRRDKINKKMRILKGLIPNCNKKDKVSMLDHAIEYLKTLKLQLQIMSMGGGLC
MPLMMLSAATNQMINTTHLPQFMGAGMGFRPQFPIAPLPGVTDNNGVGMFGFPNQVPPMP
NCHAPFIPMAGNTHTQPLVATSTATKSAENCCSVSKNSYLHGQAEHAIKQSLNQEQIEKI
SDKC
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactggcaagaaagctcttcatcattttgtagtgattaaaggatcatcacat
gctctcacaacacttcaaggacaaaaaccattgatttctgatgcacagtcagaagctgtt
gttggtcataacaaaacctcaagcttagccagactaaaagcaaagggaaaagctcattct
aactatcatgatgaacccttgctagtatcttcttcctttggatactcaaataacacaaat
cttaaaaggaaacatgatgaggctacatgtttaagtgataatgatgaggaacctgaatat
gcagtgaaggagaagcttgctgggaagggcaccaaagtcaagagaagtaggaatgcagac
actcatagtttatatgaaaggaagcgaagagataagatcaacaagaagatgcgtatattg
aaagggctcatacctaattgcaataagaaggataaagtttcaatgcttgatcatgccatc
gaatatcttaagaccctcaaacttcaattacagattatgtcaatgggtggtgggctttgt
atgcctcttatgatgttatctgctgcaactaatcaaatgatcaacacaacccatttacct
cagtttatgggagctggaatgggcttcaggcctcagttccctattgcacctttgcctggt
gtcactgataataatggagttgggatgtttggtttccctaaccaagttccacccatgcca
aattgtcatgcacctttcattcctatggctggaaatactcatacacaaccacttgtggca
actagcacagctaccaaatcggctgaaaactgctgctcagtctccaagaactcatatctt
catggacaggctgaacatgcaataaagcaatcattgaatcaggaacagattgaaaaaatt
tcagacaagtgttga
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