Lotus japonicus: 130724491
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Entry
130724491 CDS
T04348
Name
(RefSeq) transcription factor PIF4 isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130724491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130724491
Transcription factors [BR:
lja03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130724491
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
130724491
NCBI-ProteinID:
XP_057431703
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Position
6:complement(47884601..47889809)
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AA seq
526 aa
AA seq
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MNNSAPDWNFGSDTCLTNQKKPIGMDNDLVEILWQNGQLVLQSQAHKKSVVNSIASRQVN
KKFQPTLRTSDPFGMIQDDETISWIQYPPDHSLEQELCSELLSELPLCEVESYRQIRQFG
DAKFSKLDDSSMKPSCVQEFSGIPMPAPKFHASDSYQKNKVQNFPHFSALPIVSTASANA
HLRDKIAGNNVSKGEIRECSVMTVGSSHCGSNHIPQDPDISRASSNGAWTTTLSAEPEAG
RDDVHRTIPQCEKGKPEMLEPTMTSSSGGSGGSSLGKTCSLSTRSQGEKRKGIDVEEQSE
DTELKSAVGNKASRRAASARRNRAAEVHNLSERRRRDRINEKMRALQQLIPHSSKTDKAS
MLEEAIEYLKSLQLQLQVMWMGTGMTPMMFPGIQHYMSQMGMGMATPPFPPIHNPMQLPR
GPLDQSIAASQTPNQSLMSPNPILGAFNYQNQMQNPAISEQYARYMGYHLMQNASQPMNM
YRYGPQSVQHSQTMIPPSNSSGSMSGAASIDDPVSGKIGACHHVER
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagtgctcctgattggaattttgggagtgatacctgtctcaccaaccaaaag
aaacccatagggatggacaatgatcttgtggagatcctttggcaaaatggccagctagta
ttgcagagccaagcacataagaaatcagttgtgaattctatcgcctcaagacaggttaac
aaaaaatttcaaccaacattgaggactagtgatccatttgggatgatccaagatgatgag
acaatctcatggatccaataccctccggaccattcgctggaacaagaattatgttcagaa
cttttatctgaactgcctctctgtgaagttgagtcttacaggcaaatcaggcaatttgga
gatgcaaagttttccaaattggatgattccagtatgaaaccctcctgtgttcaggaattc
tcaggaattcctatgcctgctccaaaatttcatgcttctgattcatatcagaaaaacaag
gtccaaaactttccccacttttcagcactccctattgtttctacagcatctgctaatgca
catttgagagacaaaattgctggtaataatgtgtcaaaaggtgagattagagagtgctca
gtgatgacggttggttcgagtcactgcggaagcaatcacatccctcaagatcctgatata
agcagggcttcaagcaatggtgcttggactactactttatctgctgagcctgaagctggt
agagatgatgtccatagaacaattccgcagtgtgagaaaggaaaaccggagatgcttgaa
ccaactatgacttcatcttcagggggctcaggcggtagtagtcttggaaaaacttgttcc
ctatctacaagaagccagggcgaaaaaaggaaagggattgatgtggaagaacaaagtgag
gacacagaactcaaatcagctgttggaaataaagcatctcggcgagcagcgtcagcgcga
aggaaccgtgctgctgaagtgcataatttgtcagaaaggagaagaagagataggattaat
gagaagatgagggcattgcaacaactcatacctcacagtagcaagacagataaagcatca
atgctagaagaggcgatcgaatacttgaaatcacttcagttacagcttcaggtaatgtgg
atgggaactggcatgacaccaatgatgtttccaggaattcagcactatatgtcacaaatg
ggaatgggaatggctacacctccttttcctccaattcacaacccaatgcagttaccaaga
gggccactcgatcaatccatagcagcatctcagaccccaaaccagtcattaatgtcccca
aatcctattttgggtgcctttaactaccagaatcagatgcaaaatccagcaatttcagag
caatatgcgcgttacatgggctatcatcttatgcaaaatgcctctcagccaatgaatatg
tatagatatggtccccagtcagtgcaacacagccaaacaatgattccacccagcaatagc
agtggatccatgagtggagcagctagcattgatgatcctgtgagtggaaaaattggtgca
tgtcaccatgtggaacgctga
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