KEGG   Lotus japonicus: 130727404
Entry
130727404         CDS       T04348                                 
Name
(RefSeq) GTP-binding nuclear protein Ran1B
  KO
K07936  GTP-binding nuclear protein Ran
Organism
lja  Lotus japonicus
Pathway
lja03008  Ribosome biogenesis in eukaryotes
lja03013  Nucleocytoplasmic transport
lja03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130727404
   03008 Ribosome biogenesis in eukaryotes
    130727404
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130727404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    130727404
   03009 Ribosome biogenesis [BR:lja03009]
    130727404
   03016 Transfer RNA biogenesis [BR:lja03016]
    130727404
   03036 Chromosome and associated proteins [BR:lja03036]
    130727404
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    130727404
   04031 GTP-binding proteins [BR:lja04031]
    130727404
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     130727404
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    130727404
  Pre-60S particles
    130727404
Transfer RNA biogenesis [BR:lja03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    130727404
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130727404
   Spindle formation proteins
    130727404
Exosome [BR:lja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130727404
GTP-binding proteins [BR:lja04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    130727404
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 G-alpha ATPase AAA_24 ArgoMid AAA_7 Septin AAA_22 AAA_16
Other DBs
NCBI-GeneID: 130727404
NCBI-ProteinID: XP_057434513
LinkDB
Position
1:complement(86991039..86993494)
AA seq 221 aa
MALPNQQTVDYPNFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctcttccgaatcagcaaaccgttgattaccctaatttcaagctcgtcatcgtcggt
gatggtggcacaggaaagacaaccttcgtgaagaggcatcttaccggtgaattcgagaag
aaatatgaacctaccattggtgtggaggtccatcctttggatttcttcacaaactgtggc
aagatccgattctactgctgggatactgctggacaagagaagtttgggggtctcagagat
ggttactatatccatgggcaatgcgccattataatgtttgatgttactgcccgactgaca
tacaagaatgtccctacctggcaccgtgatctttgccgggtctgcgagaacatccccatt
gttctttgtggcaacaaggttgatgtgaagaacagacaggtgaaggcaaagcaggttact
ttccacaggaagaagaatctgcagtactatgagatctcagccaagagtaactataacttt
gagaagcctttcctttatcttgccaggaaacttgcaggtgatcctaacttgcactttgtt
gaatctcctgcattggctccacctgaagttcaaattgatttagctgcacaacaacagcat
gaggctgagcttgctgcggctgctagtcagccccttcctgatgatgatgatgatgcattt
gattaa

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