Lotus japonicus: 130730458
Help
Entry
130730458 CDS
T04348
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130730458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130730458
Transcription factors [BR:
lja03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130730458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
130730458
NCBI-ProteinID:
XP_057438452
LinkDB
All DBs
Position
1:complement(126862452..126871021)
Genome browser
AA seq
535 aa
AA seq
DB search
MNHHCVPDFDFQIDDQDYPSSLPMSMPSPAKKPSIADDDIMELLWQNGQVVMQSQNQRPL
RKPPPAAAVRSNNDYAPPVAGPSTAKEIRPEVENYNQHLFMQEGEMASWLHYPIDDGDDP
HPPLDQSFCADFLYPPPSDVNDNDNSAMQAPALTSRLTDLRKPPISALASPRPPIPPPRR
TELAPPQRIAEQAPPPKTTQNFACLWKHNARAEPGPSSISRTAARESTVVDSCDTPAAPA
MAPPSMISETVRSSAGGASGLAAPSTTFDEPGGSSSSGEPVQKVAAQERKRKGREAEDWE
CQSEDVDFESAEGKKQVRGSSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS
DKASMLDEAIEYLKSLQLQVQMMSMGCGMVPIMFPGIQQYMPAMGMGIGMGMGMDMGMTR
PMMPFPNMFPGSTLPAATAAAHLGPRFGMPPFHMPHIPAPDSSRMQAASLSDNNMLNSVG
APDLNQSRIPNFTDPYQQYLGPHQMQFQLMQNHATNQPSASNPSNSRGHENQEKP
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccactgcgttccagatttcgatttccaaatcgatgaccaggattacccttca
tcactacccatgtccatgccttcaccagctaagaaaccatccattgcagacgacgatatc
atggagctgctatggcaaaatggtcaggtcgtgatgcagagtcagaatcagcgtcctctc
aggaaaccaccgccggcagcggcggtgagaagcaacaacgactatgctcctcctgttgct
ggtccttccactgcgaaggagattcgtccggaggtggaaaattacaaccagcatctcttc
atgcaagaaggagaaatggcttcgtggcttcactatccaatcgacgacggtgatgatccg
catccgcctttggatcagagcttctgcgccgatttcctctatccgccgccgtcggatgtt
aacgacaacgacaacagtgccatgcaagcacctgctctcacgtctcgactcacggatctc
cggaagccaccgatttcggcgctggcttctcctcgacctccgattccgccgccgaggagg
acggaactggcgccgccgcagaggattgcggaacaggcaccgccgccgaagacgacacag
aactttgcctgtttgtggaagcataatgcgagagcggagccaggaccgtcgtcgatttcg
agaaccgcggcgagggaatcgacggtggtagattcgtgcgatacacctgccgcgccggcg
atggctccgccgtctatgatttcagagacggtgagaagctcggcgggaggagcgagcggt
ttagcggcgccatcgactacttttgatgaaccgggcggttcgagtagcagcggagagccg
gttcagaaggtggcggcgcaggagcggaagcggaaaggaagggaagcggaggactgggag
tgtcagagcgaggatgttgattttgaatctgcggaagggaaaaaacaagtccgtgggtct
tcatctacaaagagatctcgtgctgccgaggtccataatctctcagaaaggaggcgtcgt
gatcggattaatgaaaagatgaaagctttgcaagaacttatacctcgttgtaataagtct
gacaaagcttcaatgctggatgaagcaattgaatacttgaagtcgctgcagttacaagtg
cagatgatgtccatgggatgtggcatggtacctataatgtttcctggaatccagcagtat
atgcctgcaatgggaatggggattggaatgggtatgggtatggacatgggaatgaccaga
ccaatgatgccatttcccaatatgtttcctggttcaacattgccagcagcaactgcagct
gctcatttgggaccaaggtttggtatgcctcctttccacatgccacatattcctgcacct
gattcatctagaatgcaagcggcatctctatcggataacaatatgctcaactccgttggt
gcacctgatctaaatcagtcacggattccaaacttcactgatccttatcaacaatacctt
ggtccccaccagatgcagtttcaattgatgcagaatcacgcaacgaatcaaccaagtgca
agcaacccaagtaatagtaggggccatgagaatcaagaaaagccctag
DBGET
integrated database retrieval system
