Lotus japonicus: 130730985
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Entry
130730985 CDS
T04348
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
KO
K12126
phytochrome-interacting factor 3
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
lja04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130730985
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
130730985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130730985
Transcription factors [BR:
lja03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130730985
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
SURF2
CAMP_factor
Cap2_linker
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
130730985
NCBI-ProteinID:
XP_057439140
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All DBs
Position
1:complement(132701602..132704185)
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AA seq
470 aa
AA seq
DB search
MTEKMLDSIYGNDFFELVWENGQLGSSNRTTPKTPNNLCIGFSHQSNIGQGSSQIHDLQL
QSPQSKSSCKKPIDEFRNLRPMKDCTYSSQQCLPYSAPLKKPRMDSSLTPLTNSQKQNFS
NFLIPEVFLKSTNHHRKSATQTTRIALSPRVKEIEHSKVEKSTSSKGATDNSTVIESAKG
SHVLTGFRGQRFLTTNKWNTKSIVEGSAAAPPPLDEHSEAVSHSNSSNGTTQYEALAKGK
AKNDNLCNERAIASSSVCSIEASYNPNFGSRKHDQDSDDSAFLSDDDEETEDYTVKEVQA
RDGTRIKRRRSAEIHNLSERKRRDKINKKIRTLKELIPNCNKIDKASMLDDAIDYLKTLK
HQLQIMSMGRGLCMPLMMPPHLPQLMGVGMGGIPCNPPQFSIPSLPGFTDNRLQMFGFSN
QQIPNMSIPNTPFFPIIGNSSSTQQPFIAAAEPLPYSAPLTTLEASNPKN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaagatgcttgactctatttatggcaatgatttctttgagctggtgtgggaa
aatggccaactaggttcatcaaatagaacaacaccaaagactcctaataatttgtgcata
gggttttcacatcaaagcaatattggccaaggttcctctcagattcatgatttgcaatta
caatcaccacaaagcaagagttcttgtaagaagcctattgatgaatttcggaacttaaga
cctatgaaagattgcacatactcctcacaacagtgcttaccttattctgctccactcaag
aaaccaagaatggattcaagcctaacaccactaacaaactcacagaaacagaatttttcc
aactttttgatacctgaagtgtttctcaaatccactaatcatcacagaaagagtgcaaca
cagacaacaagaattgcactttcaccaagagtgaaggagattgaacatagcaaagttgag
aaatctactagtagcaaaggtgctactgacaattccacagtgattgaatcagctaaagga
tcacatgttctcacaggatttcgaggacaaagatttttaactactaacaaatggaacacc
aaatccattgttgaaggaagtgctgctgcaccaccaccacttgatgaacattctgaagct
gttagccatagtaacagttccaatggaactactcaatatgaagcacttgcaaagggaaaa
gctaaaaatgataacttgtgcaatgaacgagcaatagcttcttcttctgtatgttcgatt
gaagcctcatacaacccaaactttggtagcaggaaacatgatcaggacagtgatgattct
gcatttttaagtgatgatgatgaggaaacagaagattatacagtgaaggaagttcaagct
cgagacggtaccagaatcaagagaagaagaagcgcagagattcataatttatctgaaagg
aagcgaagagataaaatcaacaagaagatacggacactgaaggagctcatacccaactgc
aacaagattgataaagcttcaatgcttgacgatgccattgactatctaaagaccctcaaa
catcagttacagattatgtcaatggggagagggctatgtatgccacttatgatgccacca
catttgcctcagttaatgggagttggaatgggaggaatcccttgcaacccaccacagttt
tcaattccatcacttcctggtttcacagacaacagacttcagatgtttggtttctccaac
caacaaataccaaacatgtcaattcctaatacacctttcttccctatcattggaaactct
tcttctacacaacaaccatttatagcggcggcggaaccattgccttattctgcaccctta
acaactttggaggcctcaaaccccaagaactga
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