Lotus japonicus: 130747013
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Entry
130747013 CDS
T04348
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
lja
Lotus japonicus
Pathway
lja03420
Nucleotide excision repair
lja04120
Ubiquitin mediated proteolysis
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130747013
04120 Ubiquitin mediated proteolysis
130747013
09124 Replication and repair
03420 Nucleotide excision repair
130747013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130747013
03400 DNA repair and recombination proteins [BR:
lja03400
]
130747013
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
130747013
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130747013
Multi subunit type E3
SCF complex
Ring finger protein
130747013
Cul2 complex
130747013
Cul3 complex
130747013
Cul4 complex
130747013
Cul7 complex
130747013
Cul8 complex
130747013
Cul9 complex
130747013
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130747013
TCR (transcription coupled repair) factors
Cul4-CSA complex
130747013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130747013
NCBI-ProteinID:
XP_057455805
LinkDB
All DBs
Position
3:complement(88005477..88008716)
Genome browser
AA seq
117 aa
AA seq
DB search
MAETLDSDVAMVPAGEPSSSAGPSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASPTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcggagactcttgattccgatgtggcgatggttcccgccggcgaaccttcaagcagc
gccggcccttcttccaagaagtccaaacgcttcgagatcaagaagtggaacgccgtcgct
ctctgggcttgggacattgtcgttgataactgtgctatctgccgcaaccacatcatggat
ctctgtatagagtgccaagctaaccaggctagcccaactagcgaagaatgcactgtggct
tggggggtttgtaaccatgcttttcacttccattgcattagtcgatggctcaagacccgc
caagtatgtcctctagataacagtgagtgggagtttcagaaatatggccactag
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