Lactobacillus johnsonii FI9785: FI9785_982
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Entry
FI9785_982 CDS
T01120
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ljf
Lactobacillus johnsonii FI9785
Pathway
ljf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ljf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FI9785_982 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljf03400
]
FI9785_982 (nth)
Enzymes [BR:
ljf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FI9785_982 (nth)
DNA repair and recombination proteins [BR:
ljf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FI9785_982 (nth)
Prokaryotic type
FI9785_982 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
DUF4294
Q_salvage
KMP11
Transposase_20
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CAX66849
UniProt:
D0R436
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All DBs
Position
896883..897512
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AA seq
209 aa
AA seq
DB search
MEELLSDDEARLVLKRILSLYPDAKGELNWDTKFHLLCAVLMSAQTTDKMVNRTTPKFFK
DYPDSATLAQANIEDIENHIRTIGLYRTKAKHLKETAQIITEKFDGQIPKDKKILMTLPG
VGEKTANVVLAEGFKVPAIAVDTHVSRISKRFNIVSAKATPHEVEKRLEELLPKEEWIHT
HHAMILFGRYTMPARTKNQDPYSFLPPLN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattattatcagacgatgaagcacggttggttttaaaaagaattctttcttta
tatccagatgctaaaggagaattgaattgggacacaaagtttcacctattatgtgctgtt
ttaatgagtgcccagaccaccgataaaatggttaatagaactacacctaaattctttaag
gactatccagatagtgccactttggcccaagcaaatattgaagatattgaaaatcacatt
cgtacaattggtttatatcgtacaaaagctaagcatttaaaagagacagcacaaattatt
accgaaaaatttgatggtcagattccaaaagacaaaaagattttgatgaccttacctggc
gtgggggaaaagacagctaatgttgttttagcagaaggcttcaaagtaccagcaattgca
gtagatacacatgtatctcgtatttctaaaagatttaatatcgttagtgcaaaagcgact
cctcatgaagtagagaagcggcttgaagaattgcttccaaaagaagaatggattcatact
catcatgctatgattttattcggcagatatacaatgcccgctcggactaaaaatcaagat
ccatattctttcttaccaccgttaaactaa
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