KEGG   Lactobacillus johnsonii DPC 6026: LJP_0964
Entry
LJP_0964          CDS       T01960                                 
Name
(GenBank) putative endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ljh  Lactobacillus johnsonii DPC 6026
Pathway
ljh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ljh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LJP_0964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljh03400]
    LJP_0964
Enzymes [BR:ljh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LJP_0964
DNA repair and recombination proteins [BR:ljh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LJP_0964
 Prokaryotic type
     LJP_0964
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 DUF4294 Transposase_20 RecR_HhH Q_salvage
Other DBs
NCBI-ProteinID: AEB93290
LinkDB
Position
1035027..1035656
AA seq 209 aa
MEELLSDDEARLVLKRILSLYPDAKGELNWDTKFHLLCAVLMSAQTTDKMVNRTTPKFFK
DYPDSATLAQADIKDIENHIRTIGLYRTKARHLKETAQIITEKFDGQIPKDKKILMTLPG
VGEKTANVVLAEGFKVPAIAVDTHVSRISKRFNIVSAKATPHEVEKRLEELLPKEEWIHT
HHAMILFGRYTMPARTKNQDPYSFLPPLN
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaagaattattatcagacgatgaagcacgattggttttaaaaaggattctttcttta
tatccagatgctaaaggagaattgaattgggacacaaagtttcacctattatgtgctgtt
ttaatgagtgcccagaccactgataaaatggttaatagaaccacacctaaattctttaag
gactatccagatagtgccactttagcccaagcagatatcaaagatattgaaaatcacatt
cgtacaattggtttatatcgtacaaaagctaggcatttaaaagagacagcacaaattatt
accgaaaaatttgatggtcagattccaaaagataaaaagattttgatgaccttacctggc
gtgggggaaaagacggctaatgttgttttagcagaaggcttcaaagtaccagcaattgca
gtagatacacatgtatctcgtatttctaaaagatttaatatcgttagtgcaaaagcgact
cctcatgaagttgagaagcggcttgaagaattgcttccaaaagaagaatggattcatact
catcatgctatgattttattcggcagatatacaatgcccgctcggactaaaaatcaagat
ccgtattctttcttaccaccattaaactaa

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