Lactobacillus johnsonii DPC 6026: LJP_1643c
Help
Entry
LJP_1643c CDS
T01960
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh00300
Lysine biosynthesis
ljh00550
Peptidoglycan biosynthesis
ljh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LJP_1643c
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LJP_1643c
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ljh01011
]
LJP_1643c
Enzymes [BR:
ljh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LJP_1643c
Peptidoglycan biosynthesis and degradation proteins [BR:
ljh01011
]
Precursor biosynthesis
Amino acid ligase
LJP_1643c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_C
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
AEB93959
LinkDB
All DBs
Position
complement(1796376..1797947)
Genome browser
AA seq
523 aa
AA seq
DB search
MSDSSISLNTCILILKEHHLLKSSAVQDAVPTKMDYISYDSRDIKTNTLFFCKGKGFRPT
YLSMAKDSGATCYVAEQPYPEGKGMHALVVRDVTKAMALLSAAFYRFPQDDLYVVAFTGT
KGKTTSAYFLKGMLDQINGGRTALFSSVDDIVGPKPEDKFKASLTTPESLDLFRDMRTAV
DNGMTHLVMEVSSQAYKKNRVFGLTYDLGFFLNITPDHIGPNEHPNFADYLHCKLQLMVN
SRKCIINAMSDHFDEIYAAATTTTNPDSIYLFARNDFENPNLKQPIDFRFQSVETDMKET
EFKLFCASDKAKKLPIAGDYTLQMIGDFNEMNGTAAIIGAGLAGENYEECAKGIRHVTIP
GRMEALPSKNHGTVIVDYAHNKASMMALMSFMQREFNNPKIIVVVGAPGDKGVSRRPGFS
ESLTAYADKAFLTTDDPGFEDPMDIAQEIDAGIDHEKVDVTIELDREKAIHDAIAMSDKD
DIVLICGKGADPYQKIRGVDTPYPTDIKVAESVINELEKDDEE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattctagcatttctttaaacacttgcatcttaatattgaaggaacaccacttg
cttaaatcaagtgctgttcaagatgcggttccaactaaaatggattatatttcctatgat
tcacgtgatataaaaacaaataccttgttcttctgtaaaggtaaaggctttagacctact
tatttatcaatggctaaagatagtggagctacttgttatgtagcagaacaaccatatcca
gaaggtaaaggaatgcatgctttagttgttagagatgtaactaaagccatggctctttta
tctgctgccttttacagatttccgcaagatgatttgtatgtggtagcctttaccggtacc
aagggtaagacaacatctgcatacttcttgaaggggatgcttgaccaaattaatggtggt
cgaacagcactattttcatcagtagatgatattgtaggaccaaagcctgaagataaattt
aaggctagtttaactacacctgaaagtttagacttgttcagagatatgagaacagctgtt
gataacggtatgactcacttagtaatggaagtttctagtcaggcttataagaaaaatcgt
gtctttggtttgacttacgatctcggctttttcttaaatattactccagaccatattgga
ccaaatgagcaccctaactttgcagattacttgcactgtaaactgcaattaatggttaac
tcacgtaagtgcattatcaatgcaatgtctgatcacttcgatgagatttatgcggctgca
actactactacgaatccagatagtatctatttatttgccagaaatgattttgaaaatcct
aacttaaagcaaccaattgatttccgtttccaatcagttgaaactgatatgaaagaaact
gaattcaaattattctgtgcatctgataaagctaagaaattaccaattgctggtgactac
actcttcaaatgattggtgatttcaacgaaatgaatggtactgctgctattattggtgct
ggacttgccggcgaaaattatgaagaatgtgctaaaggtattcgtcacgttactattcca
ggaagaatggaagctttgccatcaaagaatcatggtactgtaattgttgattatgcacat
aataaggcttcaatgatggctttaatgagctttatgcagcgtgaatttaacaatccaaaa
atcatcgtagttgttggagctcctggtgataaaggagtatcacgtcgaccaggctttagt
gaaagtttaactgcttatgcagataaagcctttttgacaactgatgatcctggttttgaa
gatccaatggatattgcacaggaaattgatgctggtattgatcatgaaaaagttgatgtc
acaattgagttagatcgtgaaaaggcaattcatgatgcaattgcaatgtctgataaggat
gacattgttttgatttgtggtaagggagccgacccataccaaaagattcgtggagtagat
acaccatatccaactgatatcaaagttgctgaaagtgtaattaatgaactagaaaaagat
gatgaggaatag
DBGET
integrated database retrieval system
