Acetilactobacillus jinshanensis: ELX58_01280
Help
Entry
ELX58_01280 CDS
T06588
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lji
Acetilactobacillus jinshanensis
Pathway
lji03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lji00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ELX58_01280 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lji03021
]
ELX58_01280 (rpoC)
03400 DNA repair and recombination proteins [BR:
lji03400
]
ELX58_01280 (rpoC)
Enzymes [BR:
lji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ELX58_01280 (rpoC)
Transcription machinery [BR:
lji03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ELX58_01280 (rpoC)
DNA repair and recombination proteins [BR:
lji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ELX58_01280 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QBP17817
UniProt:
A0A4P6ZJY4
LinkDB
All DBs
Position
259526..263164
Genome browser
AA seq
1212 aa
AA seq
DB search
MVNVDRFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKEGLFDERIFGPTKDWQC
SCGKYKRIRYRGIICDRCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFAAYVVTNPGDTPLEKKQLLTEREYREKKNEYGNRFEAQIGAQAVETLLN
DVDLKKESAHLEKVLKTAGGQKRTRAIRRLDILQAFLKSGNKLSWMVMHVIPVIPPALRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLALHAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVSGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPHLKFNQLGLPVP
MALELFKPYLMHALVKRGIASNVKSAKRKIHNRDDDIYDVLADVIKGHPILLNRAPTLHR
LSIQAFYPVLVSGKSIRFHPLCCTAYNADFDGDQVALHVPLSDEAQAESRTLMLASTHIL
APRDGSPIITPSQDIIIGNYYITLEERHREGEGSIFNDANEAVLAYQNGYVQWHSRVGIR
VASMPKKPFTPQQRKEILVTTVGKIIMNTMYPDDFPFLNEPTKRNLRGELPDKYFLKPGE
NIFDYLKHSKLIPPFKKGMISDIIAECYRRYHIATTAIVADSLKHWGYENSMKSGLTFAI
PDIVDLKEKPYIIEAGKKKKDLVTKQYQMGLITNEERYQRVVDIWSDAKDKVQQKIQDHF
DPENDIFMMSDSGARGNISNFVQLAGMRGLMAEPNGKVMELPITANFREGLSIQQMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDCIVREHDCGTDSGLRVHALMNGGELLEPLY
ERILGRVAMKEVKNPKTGKTIVRHNQMIDEKKATEIVNSGVKEVEIRSALTCHTVHGVCA
MCYGRNLTTGKLVEVGEAVGTVAAQAIGEPGTQLTMRNFHTGGVAGNADITQGLPRVQEV
FEARHPKGRALISKVTGDVKLIEENPAENVREVTIKGKSDTQKYKIPMDQKLIVKEGDHV
HRGTPLNVGSIDPKEMLQVTNMIETANYMLGEIQKVYRMQGVDLNDKHPELIIRQLMRKV
RIMKPGDTKLLPGSLMDINDFRKANAKYVIEGKIPATARPVLLGLTKAALESKSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIVGKLIPAGTGMHRYRNIQMKEDKPADTDKSAD
DAESTADSTKED
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
ttggtcaacgttgatagatttgaaagtatgcagattggcctagcatctcctgataagatc
cgaagctggtcttatggtgaagttaaaaagccagaaacaattaattatcgtaccttaaag
cctgaaaaggaaggcttgtttgatgaacggatctttggaccgaccaaagattggcagtgt
tcttgtggtaagtacaagcgaattcgataccgtggcatcatttgtgatcgttgtggtgtt
gaagttactcgttctaacgttcgtcgtgaacggatgggccacattgaattagctgcacca
gttactcatatttggtactttaaaggcattcctagtcgaatgggcttggtattagatatg
agtccgcgagccttagaagaaattatttactttgcggcttacgttgtaactaatcctgga
gatactccattagaaaagaaacagttattaactgaacgtgaataccgtgaaaagaagaat
gaatatggtaaccgttttgaagctcagatcggtgctcaggccgttgaaaccttactaaat
gatgttgatcttaagaaagaatcagctcatttagaaaaggttttgaagactgccggtggt
cagaaacgtacccgtgccattcgtcgtttggatatcttacaggcatttttaaagtctggt
aataagttatcctggatggtaatgcacgtcattccagttattccaccagcattacgaccg
atggttcaattagaaggtggccgtttcgctacttctgatttaaacgatttataccgtcgt
gttattaaccgtaacaaccgtttgaagcgtttattagcattacatgcccctggtatcatc
gttcaaaacgaaaaacggatgttacaagaagctgttgatgccttaatcgataatggtcgt
cgtggtcgtccagtatctggtccgggtaaccgtccgttaaagtccttatcgcatatgctt
aaaggtaagcaaggtcgtttccgtcagaacctattaggtaagcgtgttgattactctggt
cgttcagtaattgatgttggacctcatttgaagttcaaccagttaggtctaccagttcca
atggcattggaattattcaagccttacttaatgcacgcattagttaaacgaggcattgct
tcaaacgttaagagcgctaagcgtaagattcataaccgtgatgatgacatttatgatgtc
ttagctgacgtcattaaaggtcacccaatcctattaaaccgtgcgcctacgttacatcgt
ttaagtattcaagccttttacccagtattagttagtggtaagtccattcgattccatcca
ctttgctgtactgcttataatgccgattttgatggtgaccaagttgcattacatgtaccg
ttaagtgatgaagcccaagctgaatcccgtacgttaatgttagcttctactcatattttg
gcaccgcgtgatggttctccaattatcacaccgtcacaagatatcatcattggtaactac
tacatcaccttagaagaacgtcatcgtgaaggtgaaggttccatctttaatgatgctaac
gaagctgtcttagcttaccagaatggttatgttcagtggcatagtcgtgttggtatccga
gttgcttccatgccgaagaagccatttactcctcagcagcgtaaagaaatcttggtaacc
accgttggtaagatcatcatgaatacgatgtatccagatgacttcccattcttgaacgaa
ccgactaagcgtaacttacgtggtgaattaccagataagtacttcttaaagcctggcgaa
aatatcttcgattacttaaagcattcgaagttaattccgccattcaagaagggcatgatc
agtgatattatcgctgaatgttaccgtcgttaccatattgctacgaccgcaatcgtcgct
gatagcttgaagcattggggttacgaaaactccatgaagtcaggcttaacgttcgctatt
cctgatattgttgacttgaaagaaaagccttacattatcgaagctggtaagaagaagaaa
gacttagtcactaagcaatatcagatgggtctaattaccaatgaagaacgttatcagcgt
gtcgttgatatctggagtgacgccaaggataaagttcaacagaagattcaagatcacttt
gatccagaaaatgatatctttatgatgtctgattccggtgcccgtggtaacatctcgaac
ttcgttcaattagctggtatgcgtggtttaatggccgaacctaatggtaaagttatggaa
ttaccaattaccgcgaatttccgtgaaggtctatccattcaacagatgttcatttccacc
catggtgcccgtaaaggtatgaccgataccgccttgaagactgccaactctggttactta
acccgtcgtttggttgatgttgctcaagactgtatcgttcgtgaacatgattgtggtact
gatagtggcttaagagttcatgctttaatgaacggtggcgaattattagaaccactgtat
gaacgaatcttaggccgtgtcgccatgaaggaagttaagaatccgaagactggaaagact
atcgttcgtcataatcagatgatcgatgaaaagaaggccacggaaattgttaactccggc
gtcaaggaagttgaaattcgttctgcattgacttgtcataccgttcatggtgtttgtgct
atgtgttacggccgtaatttgaccactggcaaattagttgaagtcggtgaagctgttggt
accgttgccgcacaagccattggtgaacctggtactcaattaactatgcgtaacttccat
accggtggtgttgctggtaatgctgatattacccaaggtctaccgcgtgtccaagaagtc
tttgaagctcgtcatccaaaaggccgtgctttaattagtaaggttactggtgacgtcaag
ttaattgaagaaaaccctgctgaaaacgttcgtgaagttactattaaaggtaaatctgat
actcagaagtataagattccgatggaccagaagttgatcgtcaaagaaggagaccacgtt
caccgtggtactccattaaacgttggttcaattgatcctaaggaaatgcttcaggttact
aacatgatcgaaaccgctaactacatgcttggtgaaattcaaaaagtttaccgtatgcaa
ggtgttgatctaaacgataagcatcctgaattaatcatccgtcaattgatgcgtaaggtt
cgaatcatgaagcctggcgataccaagttattacctggttccttgatggatatcaatgat
ttccgtaaagccaacgctaagtatgtcatcgaaggtaagattcctgccactgctcgtcca
gtattacttggtttgactaaggctgctttagaatccaagagtttcttaagtgccgcatca
ttccaggaaactactcgagtattaaccgatgctgctattcgtggtaagaacgatccgtta
gttggtttgaaagaaaacgtcatcgttggtaagttaattcctgctggtactggtatgcat
cgataccgtaatattcagatgaaggaagacaagcctgctgatactgataaatcagccgat
gacgcagaatcaactgctgacagtactaaagaagactaa
DBGET
integrated database retrieval system
