Acetilactobacillus jinshanensis: ELX58_01960
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Entry
ELX58_01960 CDS
T06588
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lji
Acetilactobacillus jinshanensis
Pathway
lji03410
Base excision repair
lji03430
Mismatch repair
lji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ELX58_01960 (recJ)
03430 Mismatch repair
ELX58_01960 (recJ)
03440 Homologous recombination
ELX58_01960 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lji03400
]
ELX58_01960 (recJ)
DNA repair and recombination proteins [BR:
lji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ELX58_01960 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ELX58_01960 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ELX58_01960 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
AlaDh_PNT_C
PGM_PMM_II
PsbR
Motif
Other DBs
NCBI-ProteinID:
QBP17937
UniProt:
A0A4P6ZK97
LinkDB
All DBs
Position
382260..384575
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AA seq
771 aa
AA seq
DB search
MQSARFNWKLIHSNHPDQVQKFAKELKINPILVKILFQRGYRDVDSIRHFLSPSPEDFHD
PFLMHDMKKGITRIEKAIENSEKITIYGDYDADGITSTSIMYETLQELGANVDYYIPNRF
RDGYGPNPDAYRRIIKNGTKLIITVDNGVAGHTAIALANKLGCDVIITDHHGLPDPLPDA
YAIIQARFPGGHYPFSDLCGAGVALKVATALTGEIPQDKLDLAAIGTVADMVSLTDENRA
IVKFGLKSIKISSRPGLQALIKTAGINLKSLNEQSISFGIAPRLNALGRMGDANVGVELL
TTLDPDRAVHLAKFVENQNQKRKQLVAKISTEAIQIANRPENRRRRTLMIVGEHWHQGVV
GIVASRLVEKFHKPSLVLDYDPNKKQAKGSGRSVKGFNLFGALNTVKDEMVSFGGHSMAC
GLTVGKNQLVAVSKALELSGKYQQLNRLSKPNLNIDAVIPIQDVNSSLYYQLRRLGPFGT
NNLQPNFEIRPDVVNGVFQMGKTNQHLRFKACGKNSKLNVVAFKQGPMANTLKAMPYQVN
VVGSIGLNVWRNRKTFQLVAKDIMVTGIRVIDRRSRYLTQNMFRPSTVYVFFHSDLAKLI
HGYLNNGSKFKLAKNLSPRDQFDNIILVDCPDNIKQFVSLIKKLNVHQLTLYLYRKRPAI
NYGMPTKDQYIRLFKFECTHQDVDVRHQSKLLASYLQVPYDILIFMIKVFYELHFISIKN
GIMNPIKNPQKRSLQNAPAYRSRLDEIDVEKRLLGVSSSQLIHYVCQLITD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgctagatttaactggaaattaattcattctaatcatccggaccaggttcag
aaatttgctaaggaattaaaaatcaacccgattttagtcaaaattctttttcagcgaggt
tatcgtgatgtcgactcgattcgtcatttcttatcaccgtcgccagaggattttcatgat
ccttttttgatgcatgatatgaaaaagggcattacccggattgaaaaagcaattgaaaat
tctgaaaaaatcaccatttatggtgattacgatgctgatgggatcacgagtacatcgata
atgtacgaaacccttcaagaattgggtgccaatgtcgattattacatcccaaatcggttt
cgtgatggttacggccctaatccagatgcataccgaaggattattaaaaacgggactaag
ttaattattaccgtagataacggtgttgcgggacataccgcaatcgctttggctaataaa
ttaggttgtgacgtgattataacggatcatcatggattacctgacccgttaccggatgca
tacgccattattcaagcccgctttccagggggtcattatccgtttagtgatctttgtggt
gctggtgttgctttaaaagtcgcaacggccttaacaggtgaaattcctcaggataaatta
gatttagcggccattggtacagttgctgatatggtctcgttaaccgatgaaaatcgagcg
attgtaaagtttggcttaaaatcaattaaaatttcgtcacgaccgggacttcaagcgttg
attaaaactgctggaattaatctgaagagccttaacgaacaaagcattagttttggaatt
gctcccagacttaacgctttgggccgaatgggcgacgcaaatgttggtgttgagctctta
accactttggatcctgatcgcgccgttcatctagctaaatttgttgaaaatcagaaccag
aaacgaaaacaactggtggccaagatctcgactgaagcaattcaaattgccaatcgacct
gaaaatcgtcgtcgacgaacgttaatgatcgttggtgagcactggcatcagggtgtcgtt
gggatcgttgccagccgattagttgagaagtttcataaaccatcgctagttctggattat
gatcctaataagaaacaggctaagggatccggacgcagtgttaaaggatttaaccttttt
ggtgcgctaaacacagttaaggatgaaatggtatcatttggtggccacagtatggcctgt
ggcttaacggtcggtaaaaatcagttagtagccgtatcgaaagctttagaattaagcggt
aaataccaacagttaaatcgcttgtctaaaccaaatttaaatattgatgcggtaattcca
attcaagacgttaattcgtcattgtattatcaattaaggcgattaggaccgttcggtacc
aacaatctgcaacctaattttgagatccgtccagacgtcgttaacggtgttttccagatg
ggtaagacaaatcagcatttacgttttaaggcttgtggtaaaaatagtaaactgaatgtc
gttgcgtttaagcaaggaccgatggcaaatacacttaaagcaatgccgtatcaggttaat
gttgtcggatcgatcggtttaaacgtttggcggaaccgaaagacttttcagttagtggct
aaggatattatggtgacggggatacgagttattgatcgacgaagccgttatcttacgcaa
aatatgtttaggccatcaacggtgtatgtattctttcattcggatttagctaaattaatt
catggatatttaaataatggttctaaatttaaattggctaaaaatttgtcgccgcgagat
cagtttgataatattatacttgttgattgtccagacaacattaagcaatttgtttcgtta
atcaaaaaactgaatgttcaccaattgacgttatatttataccgtaaacgtccagcaatt
aattatgggatgccgacaaaggatcaatacattcgtttatttaagtttgaatgtacgcat
caagatgttgatgtccgacaccagtcaaaattgctggcgtcttacttacaagttccgtat
gatatcttaatttttatgattaaggtcttttatgaacttcatttcatatcgattaaaaat
gggataatgaatccaattaaaaatccacaaaaacgttcattacaaaatgcaccggcatat
cgttcgagactagatgaaattgatgttgaaaaacgattgttgggtgtaagttctagtcag
ttgattcattatgtttgtcagttaattactgactaa
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