Acetilactobacillus jinshanensis: ELX58_02400
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Entry
ELX58_02400 CDS
T06588
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lji
Acetilactobacillus jinshanensis
Brite
KEGG Orthology (KO) [BR:
lji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lji03032
]
ELX58_02400 (topA)
03400 DNA repair and recombination proteins [BR:
lji03400
]
ELX58_02400 (topA)
Enzymes [BR:
lji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ELX58_02400 (topA)
DNA replication proteins [BR:
lji03032
]
Prokaryotic type
DNA Topoisomerases
ELX58_02400 (topA)
DNA repair and recombination proteins [BR:
lji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ELX58_02400 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
PFam54_60
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBP18019
UniProt:
A0A4V1ALL5
LinkDB
All DBs
Position
483200..485332
Genome browser
AA seq
710 aa
AA seq
DB search
MVTKTKTTKTRKKRTTRRRTRRRNRKKLVIVESPSKAKTVGKFLGRTYRVVASKGHVRDL
PKSKMGVDIKHNYKPHYISIRGKGDTIRMLKSEAKKAKKIYLASDPDREGEAISWHLAHL
LKLNVKDKNRVSFNQITRDTVRDSFKHPRTIDMNLVNAQQARRILDRLVGYSISPVLWRK
VKKGLSAGRVQSIALWLVIQRERAIKKFKPQEYWTIDLNLSKANSKFKGSFWGVNGKKRE
LHNNHDVQEVMKNVNAKQSLTITDVKKRIRHRRPTRPFTTSTMQQAANRRLHFRTGRTMM
AAQQLFEGITIGRHGNQGLITYMRTDSTRIATQAEHHAAKFIHDQFGKEYVANPPAKGKE
SKGEQDAHEAIRPTSVFRTPSSIKRYLTRDQYRLYALIWIHFVASQMTPAKINTMTLSME
QNHVDFRANGSRLIFPGFLTVYGMSNKDSNLMPDLKANDTVKIDSINPDQHFTQPPARYS
EANLIHTLEKNGVGRPSTYSPTLSTIQRRYYVRLKARRFVPTELGEIVNKIVETYFPDIV
NIKFTADLENKLDQIAAAKRNWVRVVDQFYQPFSKEVDHAQSQLKDVQVKDKLAGFNCSI
CGAPMVIKMGRYGKFDACSRFPACRNTKAIVQKIGVTCPKCKKGQVIVRRSRRGRKFYGC
SRYPKCDFVSWYKPISRKCPKDGHFLVEKRTRGGYQVVCPNHDYKEALQK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggttacaaaaacaaaaacaactaaaaccagaaagaagcggacaacgcgtcgacggact
cgacgtcgtaaccgtaaaaaattagtaattgtcgaatcaccatcgaaagctaaaaccgtt
ggtaaatttttaggccgaacttaccgggtcgttgccagtaagggccacgttagagatcta
ccaaagagtaagatgggtgtcgacattaaacataattacaaacctcactacatttcaatt
cgtggtaagggtgacaccattcggatgctaaagtccgaagctaaaaaggctaaaaaaatt
tacttagcatcggaccctgatcgtgaaggagaagccatttcttggcatttagcacattta
ttgaagttaaacgttaaggataagaaccgagtatcttttaatcagattactcgagacacc
gttcgtgattcatttaaacatccgcgaaccattgacatgaacttggtaaacgctcaacag
gcccgtcgaatccttgaccgtttagttggttattccatttcaccagtcttgtggcgtaag
gttaagaaaggcctaagtgccggccgtgtccaatcaattgccttatggctggttatccaa
cgtgaacgtgccattaagaagtttaagccacaagaatattggacgattgatttaaatctt
agtaaagctaactctaaatttaagggtagcttctggggtgttaacggtaagaaacgtgaa
ttgcataacaatcatgacgttcaggaagttatgaagaacgtcaacgctaaacagtcgtta
acgattaccgatgttaagaaacgcattcgtcatcgtcggccaactcgaccattcacgacc
agtacgatgcaacaggctgctaaccgtcgtttacacttccgaacgggtcgtactatgatg
gctgcccaacagttatttgaaggaattacgattggccgtcacggtaatcaaggtctaatt
acgtatatgcgtaccgactcgactagaattgcaactcaggccgaacaccatgccgctaaa
tttattcatgatcagtttggtaaagaatatgtagctaatccaccggctaagggtaaagaa
tccaagggtgaacaggatgctcatgaagctattcgaccaacttcggttttccggacccct
agtagtattaagcgttatctgactcgtgatcagtaccgtctttatgctttgatttggatc
catttcgtcgccagtcaaatgactccggccaagattaacaccatgacgttaagtatggaa
cagaatcacgttgactttcgtgccaacggttctcgtttaatcttccctggatttttaacg
gtatacggaatgagcaacaaagatagtaacttgatgcctgatttaaaggctaatgatacc
gttaagattgacagtatcaatcctgatcagcattttactcagccgccggcacgttacagt
gaagctaatcttattcatactttagaaaagaacggtgtgggtcgtccatcaacgtattca
ccaactttgagtactattcagcgtcgttattacgttcgtttgaaagctcgtcgatttgta
ccaaccgaattaggtgaaatcgttaataagatcgttgaaacgtacttccctgacatcgtt
aacatcaaatttacagctgatttagaaaataagctggatcagattgcggctgccaaacgg
aactgggtccgagttgtggaccaattctatcaaccattctctaaagaagttgatcatgcc
cagtcgcagttaaaagatgttcaggtcaaggataaattagctggtttcaattgttcaatc
tgtggtgcaccaatggtcatcaagatgggtcgttacggtaagtttgatgcttgctcgaga
tttccagcttgtcgaaacaccaaagccattgttcagaagatcggcgtaacctgtccaaaa
tgtaagaaaggtcaggtcatcgttcgtcgatctcggcgtggccgaaagttctacggctgt
tcacgttatccaaaatgtgatttcgtcagctggtacaagccgattagccgaaagtgtcct
aaagacggtcacttcttagttgaaaagcgaacccgtggtggttatcaggtcgtatgtccg
aaccatgattataaagaagctttacagaaataa
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