Acetilactobacillus jinshanensis: ELX58_06145
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Entry
ELX58_06145 CDS
T06588
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lji
Acetilactobacillus jinshanensis
Pathway
lji03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ELX58_06145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lji03400
]
ELX58_06145
DNA repair and recombination proteins [BR:
lji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ELX58_06145
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ELX58_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
nSTAND1
UvrA_DNA-bind
AAA_29
DnaJ_CXXCXGXG
AAA_21
AAA_16
RsgA_GTPase
Anti-TRAP
AAA_25
ATPase
nSTAND3
AAA_23
DUF4350
zf-AtTam37
cobW
Motif
Other DBs
NCBI-ProteinID:
QBP18713
UniProt:
A0A4P6ZM74
LinkDB
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Position
complement(1299655..1302204)
Genome browser
AA seq
849 aa
AA seq
DB search
MIRLPIRHKETIPNNIEVYGAKVNNLKNINVSIPLNAFVAITGVSGSGKSSLAMGVLYAE
GARRYLNALATYTRRRIGQVGRANVRKVKYLPSAIALRQRPAVPGDRSTVGTMSEGLNVL
RLIFSRLGSHQCPNGHQVPPTIKVAQAMDLPGEAMGKIKCPTCGKVFMAPSAEDFAFNSD
GACKMCQGTGKVRQIVKSRLVPDANKTISDGAVASWHLPGRNFMPWVAREVGIRINVPFK
DLTQHEKRLVFAGPRKTYAINIPSRTGKIFHMNNAEYENAFAAVKDSLATTHNARAIKRL
DRFYEFGTCPRCHGMRFDPTLYRTKLASKNIGQVCNMTLTELKPFMHKVLMWLPKTMHKL
GRTLINELMDSIKPLYDLGLDYLTLSRAGNTLSTGELQRIQLGRTLRSQTTGVLYVLDEP
SVGLHAANVAGLVKVLRQLVSQGNSLVVVDHNIDIISAADYIIEIGPKAGRWGGTIVDHG
TPKEIENSPHSLIAPFLKGDAKVIVRHRPPKDQIFKYGYLQLGISHRFNLHHVQAKFPKK
RLTVVSGYSGAGKSTLIMDGLVKSMQNQSKHQPLPSYVTKFNNGGLKRVIKIDSVPIGKN
VRSTVATYCGIWDPIRKLFAQTSLAKKRHWRAGHFSYNVKSGACPNCQGTGSISLDIQYL
PDMTMTCPVCHGKRYSQPTLQVKWHGYSIADILNLSVRDAEKVFRNQNKIEFILKALDRM
GLGYLILGESTPILSGGEAQRLKLVSQMGRHQDDTLFVFDEPSVGLHPKDVQVLNHVFDQ
LIEKGATLVVIEHDLDVIMNADYVIDLGPKGGIHGGEIVATGTPREIAKSPKSQTGKYLA
KRMHLDHLI
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgatacgattgccaattagacataaggaaacgatacctaataatatcgaagtttatggt
gctaaggttaataatttaaagaacatcaacgtctcgattccgttgaatgcgtttgttgcc
attaccggggtttccggatctggtaagtcatcattagcaatgggcgttttatatgctgaa
ggtgctcgtcgatatctaaatgcactggcaacatacaccagacgtcgaattggtcaggtc
ggtcgagcaaacgttagaaaagttaagtacttaccaagtgcgattgcgctacgacaaaga
ccagctgtacccggtgatcgctcgacagttggaacgatgtcagaaggattaaacgtttta
cgactgatattttctcggttgggttcccatcaatgtccaaatggtcatcaggttccacca
acaattaaagttgctcaagccatggatttaccaggtgaggccatgggtaaaattaaatgc
ccaacctgtggaaaagtctttatggcaccaagtgctgaagattttgcctttaattccgat
ggtgcatgtaaaatgtgtcaaggaactggaaaggttcgacaaatcgttaaatcgcgatta
gtaccagatgctaataaaaccattagtgatggtgctgtggcatcctggcatttaccaggc
cgtaactttatgccgtgggtagcacgtgaagtcggaatccgaattaatgttccatttaag
gatctgacccaacatgaaaaacgcttggtatttgcgggaccgagaaagacgtatgccatt
aatattccatcacgaaccggaaaaatctttcatatgaacaacgccgagtatgagaatgcg
tttgctgctgttaaagatagtttagcaactactcataacgctcgggctattaaacgcttg
gatcgtttctatgaatttgggacgtgtccacgttgtcatgggatgcgctttgatccaact
ttatatcggaccaaactagccagtaaaaatattggccaggtttgtaatatgaccttgacg
gaattaaaaccttttatgcacaaagtactgatgtggttaccgaaaacgatgcataagtta
ggccgaaccttaattaacgaattaatggacagcatcaaaccgctttatgatttaggatta
gattatttaactttatctcgagctggtaatactttatcgaccggtgaattacaacgaatt
caattaggtcgaaccttacggagccaaacgacaggcgttctttacgttttagatgaacca
tccgttggcttacacgctgctaatgtcgctggattagtaaaggttttacgacagttggtt
tcacagggtaattcgttagtggtggtcgatcataatatcgacattatttccgctgcagat
tacattatcgagattggaccaaaagctggtcgatggggtggcacgatcgttgatcacgga
acgccaaaagaaattgagaatagtccacattcgttgattgcgccgttcttaaaaggtgac
gctaaggttatcgtgcgtcatcgaccaccaaaagatcagatctttaaatatggttattta
caattaggtattagtcatcggtttaatcttcatcacgttcaggctaagtttcctaaaaag
cgtttaaccgtcgtttcaggttattccggagctggtaaatcgacgttgattatggacggt
ttagtaaaatcgatgcagaatcagagcaagcatcagccgttaccgtcctatgttactaaa
tttaataacgggggcttaaaacgggtcatcaagatcgattccgtcccaattgggaagaac
gttcgatcgacggtcgccacgtattgcggaatttgggatccgattcgcaaattatttgcg
cagacttcgttagctaaaaaacgacattggcgagctggtcatttctcatataacgttaaa
tcgggtgcctgcccaaattgccagggaactggatctatttcgttggatattcaatatctg
ccggatatgacaatgacctgtccggtttgtcacggtaaacgttattctcaaccgacttta
caagtgaagtggcacggttatagtattgctgacatcttaaatttgtcagtgagggatgcc
gaaaaggtctttcgtaaccaaaataaaattgagtttatcttaaaagctttagatcggatg
ggcttaggctacttaattttaggtgaaagtacaccaatcctctctggtggtgaagctcag
cgtttaaaactggtatcccaaatgggtcgtcatcaggacgacacactatttgtctttgat
gaaccgtcagtgggtttacatccgaaagatgtccaagttttaaatcatgtttttgaccag
ttaattgaaaagggtgccacattagttgtaatcgaacatgatttagacgtaattatgaac
gcagattatgtaatcgatttaggacctaaaggtggcattcatggtggtgaaatcgtagct
actggaacgccacgtgaaattgcgaaatcaccgaagagtcagaccgggaagtatcttgcc
aagcggatgcatctggatcatttaatctaa
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