Acetilactobacillus jinshanensis: ELX58_06405
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Entry
ELX58_06405 CDS
T06588
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lji
Acetilactobacillus jinshanensis
Brite
KEGG Orthology (KO) [BR:
lji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lji03019
]
ELX58_06405
03009 Ribosome biogenesis [BR:
lji03009
]
ELX58_06405
Enzymes [BR:
lji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ELX58_06405
Messenger RNA biogenesis [BR:
lji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ELX58_06405
Ribosome biogenesis [BR:
lji03009
]
Prokaryotic type
rRNA helicases
ELX58_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBP18738
UniProt:
A0A4P6ZM05
LinkDB
All DBs
Position
complement(1329745..1331073)
Genome browser
AA seq
442 aa
AA seq
DB search
MKNDFKKFGLKSYLLKAINALHFKTPTEIQDKVIPVIQQGKSVVGQSATGSGKTHAYLLP
IFNQLKLDQDKVQAVITTPSRELAYQLYNNAKQLAKYCPKTIHIADYIGGTDEARQIEKL
HHHQPQIVIGTPGRILDLINRQVLDIHTADRLVIDEADMTLDMGFLNVIDQIASHFGKKL
QMMVFSATIPQRLAPFLKKYMNHPAVEKVPVKSVINPNIDNWLMSTKGRDRAEIIYQLLT
IGQPFLVLIFANTRERVIQLTKFLRSKGLSVAMIEGGLQPRRRKRVMKQVRHLKYQFVVA
TDLAARGIDIDGVSMVINDQIPSDFRYFIHRVGRTGRNGMHGLAITLYSPDESNLVKGVE
KMGIKFVPKELKNGQIVDAPHKHRREHRRHGNKHLSAAMRGMISKKSKHVKPAYKHKIKV
ALRMNDEFNTKTYNRRKYSGKK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgactttaaaaaatttggattaaagtcttacctgttaaaggcaattaatgcg
ttacattttaagacacccaccgaaattcaagataaggtaattcctgttattcagcagggt
aaaagtgtggttggccaatccgcaactggtagtggtaaaactcacgcttatttattaccg
atttttaatcaattgaaacttgatcaagataaggtccaagctgtcatcacgaccccaagt
cgagaattagcttatcagttatacaacaacgctaagcagttagctaagtactgtccaaaa
acgattcacattgccgattacatcggtggtactgatgaagctcgtcaaatcgaaaagtta
catcatcaccaaccccagattgtcatcggaacacccggtcgaatcttagacttgattaat
cgtcaagttctagatatccatactgctgaccgattagtaattgatgaagcagatatgacg
ttagacatgggcttcttaaacgtaattgatcaaattgccagtcattttggcaagaaactt
caaatgatggtcttttccgcaaccattccgcagcgattagcaccgttcttaaagaagtac
atgaaccatcccgccgttgaaaaggtccccgttaaatcagtgattaatccaaacattgat
aactggttaatgtcgaccaagggccgtgaccgagctgaaattatttatcaattattgacg
attggccagccgttcttggttttgatcttcgctaatacccgtgaacgagtaattcagtta
actaagttccttcgttcaaaaggcttatcagttgccatgatcgaaggtggcttacagccc
cgtcgtcgaaagcgagttatgaagcaggttcgtcacttgaagtatcaattcgtggttgct
actgatttagcagcccgtggaattgatattgatggtgtctcgatggtgatcaacgatcag
attccatctgatttccgttacttcattcatcgagttggccgaaccggtcgtaacgggatg
catggcttagcaatcaccttatactcacctgacgaaagtaatttggtcaaaggtgttgaa
aagatgggcattaagttcgttccgaaagaattaaagaacggccaaattgttgatgcacct
cataagcatcgtcgtgaacaccgtcgtcacggcaataaacatttgagtgctgccatgcgt
ggaatgattagtaagaagtccaagcacgttaaacctgcttataaacataagatcaaggtt
gcgctccgaatgaatgacgaattcaacactaagacttacaatcgccgtaagtatagtggt
aaaaagtaa
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