Liolophura japonica (common chiton): 135466365
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Entry
135466365 CDS
T09976
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp04120
Ubiquitin mediated proteolysis
ljp04140
Autophagy - animal
ljp04144
Endocytosis
ljp04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135466365
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135466365
04140 Autophagy - animal
135466365
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135466365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ljp04131
]
135466365
04121 Ubiquitin system [BR:
ljp04121
]
135466365
Enzymes [BR:
ljp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135466365
Membrane trafficking [BR:
ljp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135466365
Ubiquitin system [BR:
ljp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135466365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
TRAF3_RING
zf-RING_UBOX
U-box
zf-Nse
zf-RING_5
zf-TRAF_2
RING_XB3-XBAT31
zf-rbx1
DUF3465
Nup54
Motif
Other DBs
NCBI-GeneID:
135466365
NCBI-ProteinID:
XP_064599871
LinkDB
All DBs
Position
6:81071964..81097877
Genome browser
AA seq
635 aa
AA seq
DB search
MARCVEWQDQDVLSLCATDSSHSHRLATTMEASPGYSERSEGYDYEFVPQPDPKYECPIC
LLILREPCQTECGHRFCRGCITRWLSEHETRRCPADNEPITKAQLFPDNFAKREILSLRV
RCPNAKHGCDSVVELGKVQEHEDNCPMTYQPCPLGCACILFRKDVEEHVAKSCESRRVEC
PFCHETVLAGRAQNHQQEECPNITVLCQFCQLKLMREQIKRHLDTDCPNVKVKCVFSVWG
CDTEVIRSDQANHQRDSTAFHLRLLSTAFCRYCMIQGIVPEALTTGSSPMGGVSSPDVPE
GVSDLSRLMQRHSIGAGPGVTSSPRQEPQTLPAIASTGAPLLSGVTFHSHPLPTEQQQQP
HQAVTRSSSLGATAGAVGATEEVPGTNTSTRENFFHFKSGQDTQRKDNLGMPFVLSSEFT
SLKDQNMIQDESLARHDQHILELQNKIHMLQHSNQEFKQKVHYLEEKLSFYGTLESRACN
GNFLWKVKNFSRLRREAEMGETTVLHSPAFYSSLYGYKMCVRVNLNGVDTARGTHMSIFV
HFMQGEFDDVLDWPFEGKIILSVIDQNPICEIRHHIIETLLAKPNLAAFQRPMTQRNHKG
FGYMEFVPLHILDSCSYVLNDILIIKAQVIPANAL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggccaggtgtgtggaatggcaggaccaagatgtcttatccttgtgtgccacagactct
tcccactctcacagacttgctacaacaatggaagcatctccgggttactccgagaggtcg
gagggttatgattacgagtttgtacctcagcctgaccccaagtatgaatgtccaatttgt
ctgctgatattacgtgagccgtgtcagacagagtgtgggcaccgcttctgtcggggctgc
atcaccaggtggctcagtgaacatgagaccagaaggtgccctgcagacaatgagccaatc
acaaaggcacaactttttcctgataattttgccaaacgagaaatcctgagtctgagagta
cgatgtcctaacgccaaacatggatgcgatagtgtcgtggagctgggcaaagtccaggag
cacgaggacaactgcccgatgacttaccagccctgccccctgggctgtgcttgtatcttg
ttcaggaaggacgtagaggagcatgtggcgaagtcttgtgagagccgtagggtggagtgt
ccattctgccatgagactgtcctggctgggcgtgcgcagaatcaccagcaagaagaatgt
ccaaatataactgtgctctgccagttttgtcaactgaagctcatgcgagaacagataaag
cgtcatttggatacggactgcccaaatgtgaaagtcaagtgtgttttcagtgtttggggc
tgtgatacagaggttatacgctcagatcaggcaaatcatcagagggactctacagcgttc
catctgcgtttgctgagtactgccttctgtaggtactgtatgatacagggcattgtcccg
gaggcactcacaacgggcagcagccctatggggggagttagctcccctgacgtgcccgag
ggtgtgtctgatctgagtcgactgatgcaacgtcacagcataggagcaggtcctggggtt
acaagctccccacggcaggaacctcagacattaccggctatagccagcacaggagcaccg
cttctttcgggcgtcaccttccattcacaccctcttcctacagagcaacaacaacaacca
caccaggctgtgacgcgcagctcatcgctaggggctacagcgggtgcagtgggcgcgact
gaagaagttcctgggactaacacttcgactcgggagaacttcttccactttaagtctggt
caggatactcagcgtaaggacaacctgggtatgccgtttgtattgagctcagagttcacg
tccctaaaggatcagaacatgatccaggatgagagtctagcccgccatgatcagcacatc
ctggagctccaaaacaagatccacatgttgcaacactccaaccaggagttcaagcaaaaa
gtccattacctcgaggaaaaattgtccttttatggtacgttggaatctcgtgcctgcaac
ggcaacttcttgtggaaagtgaagaatttctcgagactccggcgagaggctgagatgggt
gagaccacggtgctacatagtcctgcattttactccagcctctacggctacaagatgtgt
gtgcgggtcaacctgaacggtgtggacacagctcgcggaacacacatgtccatatttgta
catttcatgcaaggtgaatttgatgacgttctagactggccatttgagggaaaaattatt
ctaagtgtcatcgatcagaacccaatttgtgaaattcgacatcacatcattgaaactctt
ttggcaaagccaaatctggctgcttttcagagacctatgacacaacgaaaccacaaagga
tttggctatatggagtttgttcccctgcatatcttagatagctgctcctatgttctaaat
gacattctcattataaaggcccaagttattccagcaaatgcactgtga
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