Liolophura japonica (common chiton): 135471590
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Entry
135471590 CDS
T09976
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135471590
09123 Folding, sorting and degradation
03018 RNA degradation
135471590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135471590
03041 Spliceosome [BR:
ljp03041
]
135471590
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135471590
mRNA degradation factors
5'-3' decay
Lsm complex
135471590
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135471590
Complex C
U2 snRNP components
135471590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
DUF8043
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
135471590
NCBI-ProteinID:
XP_064606947
LinkDB
All DBs
Position
7:complement(55924420..55926749)
Genome browser
AA seq
103 aa
AA seq
DB search
MADDGEQPIPVQTVEEPLDLVRLSLDERIYVKMRNDRELRGRLHAYDQHLNMVLGDVEET
VTTVEIDEETYEEIYKSTKRNIPMLFVRGDGVILVSPPMRTGT
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatggcgagcagcccattcctgtgcagacagtggaagaaccacttgatctg
gttcgtctcagtttagatgaaagaatttatgtgaaaatgagaaatgacagagaactccga
gggagactacatgcttatgatcagcatttgaatatggtgcttggagatgtagaagaaaca
gtgacaactgttgagatagatgaagaaacatatgaagagatatataagtccacaaagaga
aacatcccaatgctgtttgttcgaggagatggtgtgattctagtctcccctccaatgagg
acagggacttaa
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