Liolophura japonica (common chiton): 135472939
Help
Entry
135472939 CDS
T09976
Name
(RefSeq) short transient receptor potential channel 7-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ljp04040
]
135472939
Ion channels [BR:
ljp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135472939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_4
PKD_channel
Caveolin
CNNM
Motif
Other DBs
NCBI-GeneID:
135472939
NCBI-ProteinID:
XP_064608787
LinkDB
All DBs
Position
1:complement(24386792..24433653)
Genome browser
AA seq
1030 aa
AA seq
DB search
MTETRRSATAVPSQGSLFTNFEDVQLTDEERVYLNAASMGDVGVVRQSVEENDITLNLNC
VDYMGRNALHLAIDSEKIDVIEILLDNLSFNCIEEALLHAISKGATKVVKIIIEHPNFMA
GEDRLKRLGGGEAFFRTEEKSQFSPDVTPLTLAAHYNNHEIIQMFLSRNHKIEKPHPISC
NCTDCVTKQNYDSLKRSRSRLNAYRALASPAYMALSSPDPIMTTFELRQEMMKLAEVEKE
FKSDYLGLVEQCMNFACELMDLCRGTQEVEAVLSEGCEPENGKRDPLARLKMAIRYEEKK
FVAHPNCQQHMTSIWYGSEMGFLQSLNWPKKVIYAILFIPLIPFFCVIYVFAPNSKIGAI
MRCPVTKFMTHTMSHMCFLILLAAATFRITESGVSMTSTDDLSDPRYKHLAKEEKIESLL
KETLRPANTLLTHVQICIVFWILGLLWIECKQVYNSGARGYVMDNYNFMDFIVLSMYLAS
YVLRFFTDHKVSESDNYFNGTSRAREFLINENHTGFKQFLSTIRSDKDETKSYFMEASRF
QWKPNDPEIVSDVLFAIANVISFASTTYLMPAFEVLGPLQISLGRMIGDITRFMVLFTLV
LFAFMVGLHNLYWYYGAQRIKMMLNDHVVQVHAAQAFRGLQQTFYSLFWSMFGQVSVNDI
VVKQPGPDGVRRCLTLDSERSRILCTDEIYTASIGGTSFMDSSTSIVEAVGTYMFGIYHV
VIIIVLINMLIAMMSHSFEDIQTDCDVEWKFARTKLWMNYMDEGSTLPVPFNMIPTPKSF
CYAWRFCRELFAPRTNSMLEYEKNKRQTFIKKRRETVCKNMDLKAEETSYADIMQRLVRR
YLFKLERARDENVKDSAANIPGEAIEIVEAAPPDYPPPDPPSKIPFATPVIQEADAHFQD
RDRGTRKKSGGRMHTRRSSISGSAPLATTVNIPQLDAIQRSQKLLDVRLQHLQSSSKENS
KLVDDVEFIRRLMTENQKALFNIIQALSNIQGEIVNLAQCLRPTPPPPPITQNSTSAHPR
KRSREEESKV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgacggagactcggcgttcggccacagctgtgccttcacagggctcgctcttcactaac
tttgaggatgtgcagctgacagacgaagagcgggtgtatctaaacgctgcatccatggga
gacgttggggtggtgcggcaatccgtggaggagaatgacatcaccctcaacctcaattgt
gtggattacatgggaagaaatgccttacatctagctatagacagtgagaaaattgatgtg
atcgaaattctattggataacctcagttttaattgtatagaggaggctttgcttcacgcc
atcagtaagggggcaacgaaggtcgtcaagattataattgagcacccaaatttcatggcc
ggagaggataggttaaaacgattgggtggcggggaggcgtttttcaggacggaagaaaaa
agccagttctcaccggatgtgacgccattgactctcgctgcccattacaacaaccatgag
atcattcagatgttcttgtcgaggaatcataaaatagaaaaacctcaccctatatcatgc
aattgtacagactgtgttaccaaacaaaactacgactcgttaaaacgatcccgctctaga
ttaaatgcctacagagcgctggcgagtccggcttacatggccttgtcaagtccagacccc
atcatgacgacattcgagctaaggcaggaaatgatgaaattggcggaagtggagaaagaa
ttcaagagtgattacctgggtttagtggaacagtgtatgaactttgcctgtgaactgatg
gacttgtgtcggggcacgcaggaagtggaggccgtgcttagtgaaggctgtgaacccgag
aatggcaagagagaccccttggccagactcaagatggccatccgctacgaggagaagaag
tttgtcgcccatccgaattgtcagcaacatatgacaagtatctggtatgggtcagagatg
ggctttctccagtcactgaattggccaaagaaagttatctacgccattttatttatccca
cttatcccatttttctgtgttatctacgtctttgcacctaacagcaagattggcgccata
atgagatgtcccgtgacgaagttcatgactcatacaatgtcacacatgtgcttcctcatc
ctactcgctgctgccacgttccgcatcacggagagtggcgtgtcaatgacctccacagat
gacctgtcagatcctcgctataagcacctggcaaaagaagaaaaaatagaaagtttatta
aaagagactttgaggcccgccaacaccttgctgacacatgtacaaatttgtatagttttt
tggatattaggcttgttgtggatagagtgtaaacaagtgtacaactcaggggcacgggga
tatgtcatggacaactataattttatggatttcattgttttgtccatgtaccttgcgtcg
tatgtactacggttctttacggatcacaaggtctccgaatcggacaattatttcaacggc
acaagtcgagcgagagagtttttgataaacgaaaatcacacaggatttaaacagtttctt
tccactatacgatcagacaaggacgaaactaagagctattttatggaggcctcccgtttt
caatggaaacccaacgacccggaaatcgtctcggatgtgctcttcgccatagctaatgtg
ataagcttcgctagtaccacctacctcatgccggcctttgaggttctgggtcctctccag
atttccctaggccggatgatcggtgatatcacacgcttcatggtgctatttactctagta
ttgtttgcgttcatggtgggcctacataacctctactggtattatggtgcacagaggatt
aaaatgatgttaaatgatcatgttgtccaagtccacgctgcccaagcattccgcgggtta
caacagacgttttacagtctgttttggtcaatgtttggtcaagtcagcgtaaatgacata
gtggtcaagcagcccgggcctgacggtgtacgacggtgcctcacgttagacagcgaacga
agtagaatattgtgtactgatgaaatttatactgcctccataggtggcacatccttcatg
gacagcagcacttcgatagtagaggccgtgggcacttacatgtttggcatctatcatgtc
gtcatcatcatcgtcctcattaacatgctcatcgctatgatgagtcactcattcgaagac
atccagactgactgtgacgtcgagtggaaatttgctcggacgaagctttggatgaattac
atggatgagggcagtaccttgcccgttccattcaatatgatccccactcccaaatccttc
tgctatgcctggagattttgtcgggagttgttcgcgcctcgaaccaacagcatgctggaa
tacgaaaagaacaaacgacagacgttcataaagaaacgccgagaaacagtttgcaaaaac
atggacttgaaggctgaagagacgtcttacgctgatataatgcagagattggttcggagg
tatctgtttaaactggagagagcacgcgacgaaaatgttaaagactctgcagcaaatatt
ccaggagaagccatagagatcgtcgaggctgcaccgccggattaccccccaccggaccct
ccatcaaagatcccattcgccacgccggttattcaagaagcagatgcacactttcaggat
agggatagaggtacgaggaaaaaatccggcggaaggatgcacactcgccgctcctcaatt
tccggcagcgcgcccttggcaacaactgtgaacattccgcagctagatgctattcagagg
tctcaaaagctgctggatgtacgattacagcatctacagtcaagtagcaaggaaaattcg
aaactagtggacgatgtcgaatttattcgtcgcttaatgactgagaatcaaaaagctttg
tttaatattattcaggccttgtctaacattcagggagaaattgtgaatctagcccaatgc
ctacgacctaccccccctccaccgcccattacccagaattcaacatcggctcatccccgg
aagcgttccagggaggaggagagcaaagtttag
DBGET
integrated database retrieval system
